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L2_013_000G1_scaffold_1623

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1623_1
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..208
-----------------
DNA (207bp)
protein (69aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N2S1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77261.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L2_013_000G1_scaffold_1623_2
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

353..592
-----------------
DNA (240bp)
protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75822.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
alpha/beta hydrolase fold family protein
L2_013_000G1_scaffold_1623_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

579..896
-----------------
DNA (318bp)
protein (106aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75823.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_013_000G1_scaffold_1623_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1619..6628
-----------------
DNA (5010bp)
protein (1670aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZH7_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EDS75824.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
LPXTG-motif cell wall anchor domain-containing protein
L2_013_000G1_scaffold_1623_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6799..7749
-----------------
DNA (951bp)
protein (317aa)
Sugar-binding domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZH8_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EDS75825.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_013_000G1_scaffold_1623_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7749..9056
-----------------
DNA (1308bp)
protein (436aa)
Signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZH9_9FIRM
Histidine kinase {ECO:0000313|EMBL:EDS75826.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_013_000G1_scaffold_1623_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9049..9723
-----------------
DNA (675bp)
protein (225aa)
Response regulator receiver domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZI0_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDS75827.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
two-component system response regulator
L2_013_000G1_scaffold_1623_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9716..11005
-----------------
DNA (1290bp)
protein (430aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZI1_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDS75828.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_013_000G1_scaffold_1623_9
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11114..11569
-----------------
DNA (456bp)
protein (152aa)
Phosphotransferase system, mannose/fructose-specific component IIA (EC:2.7.1.69)
PTS system fructose IIA component n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZI2_9FIRM
PTS system fructose IIA component {ECO:0000313|EMBL:EDS75829.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_013_000G1_scaffold_1623_10
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11585..12076
-----------------
DNA (492bp)
protein (164aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
PTS system sorbose subfamily IIB component n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZI3_9FIRM
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:EDS75830.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_013_000G1_scaffold_1623_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12097..12948
-----------------
DNA (852bp)
protein (284aa)
PTS system, IIC component {ECO:0000313|EMBL:EDS75831.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDS75831.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
PTS system, IIC component n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZI4_9FIRM
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L2_013_000G1_scaffold_1623_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12950..13786
-----------------
DNA (837bp)
protein (279aa)
PTS system mannose/fructose/sorbose family IID component n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZI5_9FIRM
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:EDS75832.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
PTS system IID component, Man family (TC 4.A.6)
L2_013_000G1_scaffold_1623_13
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13801..14070
-----------------
DNA (270bp)
protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75833.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_013_000G1_scaffold_1623_14
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14118..14924
-----------------
DNA (807bp)
protein (269aa)
Cof-like hydrolase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZI7_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EDS75834.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
cof family hydrolase
L2_013_000G1_scaffold_1623_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14926..16632
-----------------
DNA (1707bp)
protein (569aa)
Putative mannose-6-phosphate isomerase, class I n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZI8_9FIRM
Putative mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EDS75835.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_013_000G1_scaffold_1623_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16793..17596
-----------------
DNA (804bp)
protein (268aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75836.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_013_000G1_scaffold_1623_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17691..19061
-----------------
DNA (1371bp)
protein (457aa)
Transporter n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZJ0_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
SNF family Na+-dependent transporter
L2_013_000G1_scaffold_1623_18
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19143..19880
-----------------
DNA (738bp)
protein (246aa)
Bacterial peptidase A24, N-terminal domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZJ1_9FIRM
Bacterial peptidase A24, N-terminal domain protein {ECO:0000313|EMBL:EDS75838.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
type IV leader peptidase family protein
L2_013_000G1_scaffold_1623_19
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20209..22788
-----------------
DNA (2580bp)
protein (860aa)
Putative calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZJ3_9FIRM
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EDS75840.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
HAD ATPase, P-type, IC family protein
L2_013_000G1_scaffold_1623_20
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22944..23072
-----------------
DNA (129bp)
protein (43aa)
Putative sporulation protein YunB n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZJ4_9FIRM
Putative sporulation protein YunB {ECO:0000313|EMBL:EDS75841.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_013_000G1_scaffold_1623_21
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23076..23471
-----------------
DNA (396bp)
protein (132aa)
Putative sporulation protein YunB n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZJ4_9FIRM
Putative sporulation protein YunB {ECO:0000313|EMBL:EDS75841.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
sporulation protein
L2_013_000G1_scaffold_1623_22
Leptotrichia goodfellowii, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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23610..24062
-----------------
DNA (453bp)
protein (151aa)
Uncharacterized protein n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GNL1_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EEY34308.1}; TaxID=596323 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia goodfellowii F0264.;"
Pyridoxamine 5'-phosphate oxidase.
L2_013_000G1_scaffold_1623_23
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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24139..24459
-----------------
DNA (321bp)
protein (107aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IU76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22512.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L2_013_000G1_scaffold_1623_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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24828..25310
-----------------
DNA (483bp)
protein (161aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTX4_BIFLS
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase {ECO:0000313|EMBL:KEY28743.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_013_000G1_scaffold_1623_25
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25436..25561
-----------------
DNA (126bp)
protein (42aa)
DNA-binding protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CM82_9FIRM
DNA-binding protein {ECO:0000313|EMBL:EDY33800.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Predicted transcriptional regulators
Displaying 25 items

View Taxonomy