ggKbase home page

L2_013_000G1_scaffold_4302

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_4302_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(127..1107)
DNA (981bp) protein (327aa)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGY3_9FIRM
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) {ECO:0000313|EMBL:CDA26165.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L2_013_000G1_scaffold_4302_2
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1119..1760)
DNA (642bp) protein (214aa)
Flavodoxin family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C420_9FIRM
Flavodoxin family protein {ECO:0000313|EMBL:EDS74404.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Flavodoxin
L2_013_000G1_scaffold_4302_3
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1777..2427)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N0N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS20128.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L2_013_000G1_scaffold_4302_4
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2411..2932)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4V2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99172.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Predicted peptidase
L2_013_000G1_scaffold_4302_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2929..3297)
DNA (369bp) protein (123aa)
Predicted peptidase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3X6_9FIRM
Predicted peptidase
Predicted peptidase {ECO:0000313|EMBL:CBL25938.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_013_000G1_scaffold_4302_6
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3304..3921)
DNA (618bp) protein (206aa)
Multimeric flavodoxin wrbA family protein n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DWR4_9FIRM
Multimeric flavodoxin wrbA family protein {ECO:0000313|EMBL:CCO06867.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
NADPH-dependent FMN reductase
L2_013_000G1_scaffold_4302_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3934..4779)
DNA (846bp) protein (282aa)
Organophosphate reductase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QH54_9CLOT
Organophosphate reductase {ECO:0000313|EMBL:EKY26917.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
aldo/keto reductase family protein
L2_013_000G1_scaffold_4302_8
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4796..5353)
DNA (558bp) protein (186aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LXP8_TEPAE
flavin reductase domain-containing protein
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:CCP26814.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
L2_013_000G1_scaffold_4302_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5379..6227)
DNA (849bp) protein (283aa)
2 5-didehydrogluconate reductase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4K1_9FIRM
2 5-didehydrogluconate reductase {ECO:0000313|EMBL:CCZ23715.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
2,5-didehydrogluconate reductase
L2_013_000G1_scaffold_4302_10
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(6240..7088)
DNA (849bp) protein (283aa)
Methylglyoxal reductase (NADPH-dependent) n=1 Tax=Clostridium sp. CAG:967 RepID=R5KRL7_9CLOT
Methylglyoxal reductase (NADPH-dependent) {ECO:0000313|EMBL:CCY63751.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
aldo/keto reductase family oxidoreductase
L2_013_000G1_scaffold_4302_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7196..8071
DNA (876bp) protein (292aa)
Transcriptional regulator LysR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QBL8_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CCZ23714.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
LysR family transcriptional regulator
L2_013_000G1_scaffold_4302_12
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8176..9321)
DNA (1146bp) protein (382aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EET58283.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EET58283.1};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Alcohol dehydrogenase, iron-dependent n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LM68_9FIRM
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L2_013_000G1_scaffold_4302_13
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9340..9903)
DNA (564bp) protein (188aa)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBB9_9FIRM
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:EET62250.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
L2_013_000G1_scaffold_4302_14
unknown

Not on your lists

comp(9963..10085)
DNA (123bp) protein (41aa)

This feature has no annotations

L2_013_000G1_scaffold_4302_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10410..10625)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4L1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74040.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Displaying 15 items

View Taxonomy