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L2_013_000G1_scaffold_3158

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_3158_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(276..908)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50136.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
VanZ family protein
L2_013_000G1_scaffold_3158_2
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1166..1396)
DNA (231bp) protein (77aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYK3_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDO59630.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
acetyltransferase
L2_013_000G1_scaffold_3158_3
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1445..1969)
DNA (525bp) protein (175aa)
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J2E7_9CLOT
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:CDB51891.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_013_000G1_scaffold_3158_4
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1971..2333)
DNA (363bp) protein (121aa)
Dihydroneopterin aldolase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HXI4_9FIRM
Dihydroneopterin aldolase {ECO:0000313|EMBL:CDB42583.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
dihydroneopterin aldolase
L2_013_000G1_scaffold_3158_5
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2330..3148)
DNA (819bp) protein (273aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Dihydropteroate synthase n=1 Tax=Clostridium sp. CAG:217 RepID=R6ING5_9CLOT
dihydropteroate synthase
L2_013_000G1_scaffold_3158_6
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3160..3717)
DNA (558bp) protein (186aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
GTP cyclohydrolase 1 n=1 Tax=Clostridium sp. CAG:217 RepID=R6JP34_9CLOT
GTP cyclohydrolase I
L2_013_000G1_scaffold_3158_7
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3728..4657)
DNA (930bp) protein (310aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Clostridium sp. CAG:678 RepID=R5L0Q1_9CLOT
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:CCY66652.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
L2_013_000G1_scaffold_3158_8
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5055..6416
DNA (1362bp) protein (454aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q905_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
dnaA; Chromosomal replication initiator protein DnaA
L2_013_000G1_scaffold_3158_9
unknown

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comp(6260..6571)
DNA (312bp) protein (104aa)

This feature has no annotations

L2_013_000G1_scaffold_3158_10
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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6639..7751
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BD74_9FIRM
L2_013_000G1_scaffold_3158_11
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7979..8239
DNA (261bp) protein (87aa)
Uncharacterized conserved protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KIK7_9CLOT
Uncharacterized conserved protein {ECO:0000313|EMBL:CCY66655.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L2_013_000G1_scaffold_3158_12
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8226..9314
DNA (1089bp) protein (363aa)
DNA replication and repair protein RecF n=1 Tax=Clostridium sp. CAG:678 RepID=R5L044_9CLOT
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|SAAS:SAAS00122784}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
DNA replication and repair protein RecF
L2_013_000G1_scaffold_3158_13
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9314..9589
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QBG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC33155.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_013_000G1_scaffold_3158_14
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9591..11537
DNA (1947bp) protein (649aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Clostridium sp. CAG:217 RepID=R6IRJ2_9CLOT
L2_013_000G1_scaffold_3158_15
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11563..14115
DNA (2553bp) protein (851aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Clostridium sp. CAG:217 RepID=R6J008_9CLOT
Displaying 15 items

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