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L2_013_000G1_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 214 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_21_1
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(280..1809)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD00108.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L2_013_000G1_scaffold_21_2
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1814..2983)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K748_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KFI86549.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Polysaccharide pyruvyl transferase
L2_013_000G1_scaffold_21_3
Lysinibacillus boronitolerans, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2980..3996)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Lysinibacillus boronitolerans RepID=UPI000302E7B0
Uncharacterized protein {ECO:0000313|EMBL:KGR81340.1}; TaxID=1294264 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus boronitolerans JCM 21713 = 10a = NBRC 103108.;"
glycosyl transferase
L2_013_000G1_scaffold_21_4
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4010..5125)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B41F13
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFQ45972.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
L2_013_000G1_scaffold_21_5
Paenibacillus wynnii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5136..6236)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Paenisporosarcina sp. TG-14 RepID=UPI0003087244
Glycosyltransferase {ECO:0000313|EMBL:KGE18326.1}; TaxID=268407 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus wynnii.;"
glycosyltransferase family 1
L2_013_000G1_scaffold_21_6

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comp(6338..13033)
DNA (6696bp) protein (2232aa)
UPI0003D63BAE related cluster n=1 Tax=unknown RepID=UPI0003D63BAE
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ETJ20211.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
putative cell surface protein
L2_013_000G1_scaffold_21_7
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(13083..13940)
DNA (858bp) protein (286aa)
LicD family protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LXN9_9FIRM
LicD family protein {ECO:0000313|EMBL:CDB88454.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
lipopolysaccharide cholinephosphotransferase
L2_013_000G1_scaffold_21_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13955..14722)
DNA (768bp) protein (256aa)
Glycosyl transferase 2 family protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z5F1_9CLOT
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:CDD41460.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Sugar transferases involved in lipopolysaccharide synthesis
L2_013_000G1_scaffold_21_9
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14741..15508)
DNA (768bp) protein (256aa)
Capsular polysaccharide biosynthesis protein putative tyrosine-protein kinase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NP52_9CLOT
Capsular polysaccharide biosynthesis protein putative tyrosine-protein kinase {ECO:0000313|EMBL:CDC10159.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
capsular polysaccharide biosynthesis protein, putative tyrosine-protein kinase
L2_013_000G1_scaffold_21_10
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(15447..16292)
DNA (846bp) protein (282aa)
Chain length determinant protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LLX6_9FIRM
Chain length determinant protein {ECO:0000313|EMBL:CDB88458.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
capsular exopolysaccharide family
L2_013_000G1_scaffold_21_11
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(16316..17017)
DNA (702bp) protein (234aa)
MW0103 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LXP4_9FIRM
MW0103 {ECO:0000313|EMBL:CDB88459.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein
L2_013_000G1_scaffold_21_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17052..18107)
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RSC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71694.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
cell envelope-related function transcriptional attenuator common domain
L2_013_000G1_scaffold_21_13
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18481..19536)
DNA (1056bp) protein (352aa)
Site-specific recombinase phage integrase family n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5YS48_9FIRM
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDA19437.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
Site-specific recombinase XerD
L2_013_000G1_scaffold_21_14
unknown

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20292..20603
DNA (312bp) protein (104aa)

This feature has no annotations

L2_013_000G1_scaffold_21_15
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20608..22014
DNA (1407bp) protein (469aa)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:678 RepID=R5KNB8_9CLOT
L2_013_000G1_scaffold_21_16
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22269..23693)
DNA (1425bp) protein (475aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
purF; Amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QAE3_9FIRM
L2_013_000G1_scaffold_21_17
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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comp(23708..24442)
DNA (735bp) protein (245aa)
Glutamate synthase alpha subunit domain protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7ARG4_9FIRM
Glutamate synthase alpha subunit domain protein {ECO:0000313|EMBL:CDD63448.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
glutamate synthase subunit alpha domain-containing protein
L2_013_000G1_scaffold_21_18
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24439..25701)
DNA (1263bp) protein (421aa)
NAD(P)H-nitrite reductase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QRC3_9FIRM
NAD(P)H-nitrite reductase {ECO:0000313|EMBL:CDC33361.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
putative NADH dehydrogenase
L2_013_000G1_scaffold_21_19
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25698..26138)
DNA (441bp) protein (147aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6ILZ9_9CLOT
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:CDB51373.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
4Fe-4S ferredoxin
L2_013_000G1_scaffold_21_20
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26150..27652)
DNA (1503bp) protein (501aa)
Glutamate synthase (NADPH) GltB2 subunit n=1 Tax=Clostridium sp. CAG:217 RepID=R6IY52_9CLOT
Glutamate synthase (NADPH) GltB2 subunit {ECO:0000313|EMBL:CDB51374.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
glutamate synthase family protein
L2_013_000G1_scaffold_21_21
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(27649..28749)
DNA (1101bp) protein (367aa)
Glutamate synthase large subunit GltB glutamine amidotransferase component n=1 Tax=Clostridium sp. CAG:217 RepID=R6IQ21_9CLOT
Glutamate synthase large subunit GltB glutamine amidotransferase component {ECO:0000313|EMBL:CDD63458.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
glutamate synthase large subunit GltB glutamine amidotransferase component
L2_013_000G1_scaffold_21_22
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29232..30575)
DNA (1344bp) protein (448aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
glnA; Glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Clostridium sp. CAG:217 RepID=R6JMV4_9CLOT
L2_013_000G1_scaffold_21_23
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30777..31970)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IM04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51378.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
poly-gamma-glutamate synthesis protein
L2_013_000G1_scaffold_21_24
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31989..32399)
DNA (411bp) protein (137aa)
NUDIX hydrolase n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SIV7_9BACL
NUDIX hydrolase {ECO:0000313|EMBL:EHQ60966.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
NUDIX hydrolase
L2_013_000G1_scaffold_21_25
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(32428..33165)
DNA (738bp) protein (246aa)
Capsular polysaccharide biosynthesis protein (EC:3.1.3.48)
Tyrosine-protein phosphatase CpsB n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BE93_9FIRM
Tyrosine-protein phosphatase CpsB {ECO:0000313|EMBL:CDD63797.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
L2_013_000G1_scaffold_21_26
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33169..33957)
DNA (789bp) protein (263aa)
capsular exopolysaccharide family protein (EC:2.7.10.2)
Capsular exopolysaccharide family n=1 Tax=Clostridium sp. CAG:678 RepID=R5KRH4_9CLOT
Capsular exopolysaccharide family {ECO:0000313|EMBL:CCY67669.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
L2_013_000G1_scaffold_21_27
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33957..34736)
DNA (780bp) protein (260aa)
Chain length determinant protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IQ36_9CLOT
Chain length determinant protein {ECO:0000313|EMBL:CDB51385.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
polysaccharide biosynthesis protein
L2_013_000G1_scaffold_21_28
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

34955..37669
DNA (2715bp) protein (905aa)
Uncharacterized protein n=2 Tax=root RepID=R7ASA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD63798.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
cell wall surface anchor family protein
L2_013_000G1_scaffold_21_29
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37676..39322
DNA (1647bp) protein (549aa)
Metallophosphoesterase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IQ31_9CLOT
Metallophosphoesterase {ECO:0000313|EMBL:CDB51380.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L2_013_000G1_scaffold_21_30
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39353..39892
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6EFV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA88922.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
hypothetical protein
Displaying items 1-30 of 214 in total

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