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L2_013_000G1_scaffold_379

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_379_1
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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235..1341
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KN08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY68128.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
aminoglycoside phosphotransferase
L2_013_000G1_scaffold_379_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1676..3148
DNA (1473bp) protein (491aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CNB4_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ58137.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ABC transporter ATP-binding protein
L2_013_000G1_scaffold_379_3
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3218..3526)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KJ52_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY66860.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L2_013_000G1_scaffold_379_4
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3610..4941)
DNA (1332bp) protein (444aa)
Germination protein YpeB n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QS71_9FIRM
Germination protein YpeB {ECO:0000313|EMBL:CDC33626.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
germination protein YpeB
L2_013_000G1_scaffold_379_5
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5164..5982
DNA (819bp) protein (273aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
proB; Glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1H8_9CLOT
L2_013_000G1_scaffold_379_6
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5954..7192
DNA (1239bp) protein (413aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XK69_9FIRM
L2_013_000G1_scaffold_379_7
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7324..8760
DNA (1437bp) protein (479aa)
Polysaccharide biosynthesis protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QCV6_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDC33630.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_013_000G1_scaffold_379_8
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8843..11287
DNA (2445bp) protein (815aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
Phosphorylase n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BF04_9FIRM
glycogen/starch/alpha-glucan phosphorylase
L2_013_000G1_scaffold_379_9
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11329..13215
DNA (1887bp) protein (629aa)
Glycosidases (EC:3.2.1.41)
Alpha amylase catalytic domain protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L0P1_9CLOT
Alpha amylase catalytic domain protein {ECO:0000313|EMBL:CCY66866.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
L2_013_000G1_scaffold_379_10
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(13267..13905)
DNA (639bp) protein (213aa)
Putative transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BE28_9FIRM
Putative transcriptional regulator {ECO:0000313|EMBL:CDD64095.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
Predicted transcription factor, homolog of eukaryotic MBF1
L2_013_000G1_scaffold_379_11
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14043..14765)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L7A5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY68887.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L2_013_000G1_scaffold_379_12
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14765..15925)
DNA (1161bp) protein (387aa)
Sporulation integral membrane protein YtvI n=1 Tax=Clostridium sp. CAG:678 RepID=R5KL88_9CLOT
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:CCY67498.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
ytvI; sporulation integral membrane protein YtvI
L2_013_000G1_scaffold_379_13
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

16199..16636
DNA (438bp) protein (146aa)
ACT domain protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BDJ4_9FIRM
ACT domain protein {ECO:0000313|EMBL:CDD63775.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
amino acid-binding ACT protein
L2_013_000G1_scaffold_379_14
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16651..17874
DNA (1224bp) protein (408aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
Homoserine dehydrogenase n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XCZ2_9FIRM
homoserine dehydrogenase
L2_013_000G1_scaffold_379_15
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17902..19113
DNA (1212bp) protein (404aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
aspartate kinase, monofunctional class (EC:2.7.2.4)
Aspartokinase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QIM0_9FIRM
L2_013_000G1_scaffold_379_16
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19260..19724
DNA (465bp) protein (155aa)
Transcription elongation factor GreA n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XAS0_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
greA; transcription elongation factor GreA
L2_013_000G1_scaffold_379_17
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19744..22020
DNA (2277bp) protein (759aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RDQ6_9FIRM
L2_013_000G1_scaffold_379_18
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22360..23298
DNA (939bp) protein (313aa)
Alpha/beta hydrolase fold protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6P352_9CLOT
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CDC12896.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L2_013_000G1_scaffold_379_19
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23552..24070
DNA (519bp) protein (173aa)
GtrA family protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NHR7_9CLOT
GtrA family protein {ECO:0000313|EMBL:CDC10725.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L2_013_000G1_scaffold_379_20
Mycoplasma sp. CAG:776, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(24115..24318)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Mycoplasma sp. CAG:776 RepID=R7NII3_9MOLU
Uncharacterized protein {ECO:0000313|EMBL:CDF11912.1}; TaxID=1262906 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:776.;"
hypothetical protein
L2_013_000G1_scaffold_379_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24334..24798)
DNA (465bp) protein (155aa)
Predicted transcriptional regulators n=2 Tax=Clostridiales RepID=D4M096_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL27456.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_013_000G1_scaffold_379_22
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(25049..25507)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BJ66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD65183.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
hypothetical protein
L2_013_000G1_scaffold_379_23
Shuttleworthia sp. MSX8B, Shuttleworthia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25504..26445)
DNA (942bp) protein (314aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EUB12934.1}; EC=2.4.-.- {ECO:0000313|EMBL:EUB12934.1};; TaxID=936574 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Shuttleworthia.;" source="Shuttleworthia sp. MSX8B.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I451_9FIRM
Glycosyltransferases involved in cell wall biogenesis
L2_013_000G1_scaffold_379_24
Clostridium sp. CAG:571, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26433..28376)
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:571 RepID=R5Y6C4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA16771.1}; TaxID=1262822 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:571.;"
putative membrane protein
L2_013_000G1_scaffold_379_25
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28794..29447
DNA (654bp) protein (218aa)
Nucleotidyltransferase domain protein n=3 Tax=Lachnospiraceae RepID=C9L6I6_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG80827.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
nucleotidyltransferase family protein
L2_013_000G1_scaffold_379_26
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29549..30319
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AHW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90164.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
LPXTG-site transpeptidase (sortase) family protein
L2_013_000G1_scaffold_379_27
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30316..31191
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q7G4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32643.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L2_013_000G1_scaffold_379_28
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31205..31948
DNA (744bp) protein (248aa)
ABC transporter n=1 Tax=Clostridium sp. CAG:217 RepID=R6JND1_9CLOT
ABC transporter {ECO:0000313|EMBL:CDB51532.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L2_013_000G1_scaffold_379_29
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32153..32746)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JDE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32016.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L2_013_000G1_scaffold_379_30
unknown

Not on your lists

33606..34187
DNA (582bp) protein (194aa)

This feature has no annotations

Displaying items 1-30 of 66 in total

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