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L2_013_000G1_scaffold_2741

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2741_1
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..251
DNA (249bp) protein (83aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Uracil phosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IKP3_9CLOT
upp; uracil phosphoribosyltransferase
L2_013_000G1_scaffold_2741_2
unknown

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comp(171..338)
DNA (168bp) protein (56aa)

This feature has no annotations

L2_013_000G1_scaffold_2741_3
Streptococcus infantis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(386..1480)
DNA (1095bp) protein (365aa)
UPI0003DE77C4 related cluster n=1 Tax=unknown RepID=UPI0003DE77C4
Fibrillar surface protein {ECO:0000313|EMBL:EFO54833.1}; TaxID=871237 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus infantis SK1302.;"
clfB; clumping factor B
L2_013_000G1_scaffold_2741_4
Listeria monocytogenes, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1548..2411)
DNA (864bp) protein (288aa)
InlA (Fragment) n=1 Tax=Listeria monocytogenes RepID=Q2L8H6_LISMN
InlA {ECO:0000313|EMBL:ABC72029.1}; Flags: Fragment;; TaxID=1639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria monocytogenes.;"
inlA; internalin A
L2_013_000G1_scaffold_2741_5
unknown

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comp(2715..5306)
DNA (2592bp) protein (864aa)

This feature has no annotations

L2_013_000G1_scaffold_2741_6
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5281..6183)
DNA (903bp) protein (301aa)
ABC transporter related protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NAG3_9CLOT
ABC transporter related protein {ECO:0000313|EMBL:CDC09003.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
ABC transporter
L2_013_000G1_scaffold_2741_7
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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6494..6670
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=2 Tax=Firmicutes RepID=R6QNK2_9FIRM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
30S ribosomal protein S21
L2_013_000G1_scaffold_2741_8
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6724..7161
DNA (438bp) protein (146aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XAY9_9FIRM
L2_013_000G1_scaffold_2741_9
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7197..7754
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Clostridium sp. CAG:678 RepID=R5L1A5_9CLOT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
translation elongation factor P
L2_013_000G1_scaffold_2741_10
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7774..8190
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XD55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA12795.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
hypothetical protein
L2_013_000G1_scaffold_2741_11
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(8259..9692)
DNA (1434bp) protein (478aa)
YbbR-like protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BCH6_9FIRM
YbbR-like protein {ECO:0000313|EMBL:CDD63396.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
hypothetical protein
L2_013_000G1_scaffold_2741_12
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(9689..10558)
DNA (870bp) protein (290aa)
TIGR00159 family protein n=2 Tax=root RepID=R7ARC8_9FIRM
TIGR00159 family protein {ECO:0000313|EMBL:CDD63398.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
hypothetical protein
L2_013_000G1_scaffold_2741_13
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(10684..11814)
DNA (1131bp) protein (377aa)
Cysteine desulfurase family protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BCE8_9FIRM
Cysteine desulfurase family protein {ECO:0000313|EMBL:CDD63401.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
cysteine desulfurase family protein
L2_013_000G1_scaffold_2741_14
unknown

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comp(11817..12032)
DNA (216bp) protein (72aa)

This feature has no annotations

L2_013_000G1_scaffold_2741_15
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12164..12454)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XIF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA12159.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
hypothetical protein
L2_013_000G1_scaffold_2741_16
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12470..12715)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L546_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY68132.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L2_013_000G1_scaffold_2741_17
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12815..13615)
DNA (801bp) protein (267aa)
ABC-type uncharacterized transport system ATPase component n=1 Tax=Clostridium sp. CAG:678 RepID=R5KJY8_9CLOT
ABC-type uncharacterized transport system ATPase component {ECO:0000313|EMBL:CCY67048.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
ABC-type uncharacterized transport system, ATPase component
L2_013_000G1_scaffold_2741_18
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13608..14537)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KPR7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67049.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
ABC-type uncharacterized transport system, permease component
L2_013_000G1_scaffold_2741_19
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14621..15601)
DNA (981bp) protein (327aa)
ABC-type uncharacterized transport system periplasmic component n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XEI6_9FIRM
ABC-type uncharacterized transport system periplasmic component {ECO:0000313|EMBL:CDA13275.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
ABC-type uncharacterized transport system, periplasmic component
L2_013_000G1_scaffold_2741_20
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15697..16521)
DNA (825bp) protein (275aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium sp. CAG:678 RepID=R5KN12_9CLOT
Displaying 20 items

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