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L2_013_000G1_scaffold_575

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_575_1
Bacillus sp. 1NLA3E, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(231..740)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Bacillus sp. 1NLA3E RepID=N0B063_9BACI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK54056.1}; TaxID=666686 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 1NLA3E.;"
L2_013_000G1_scaffold_575_2
unknown

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comp(737..958)
DNA (222bp) protein (74aa)

This feature has no annotations

L2_013_000G1_scaffold_575_3
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1073..2437
DNA (1365bp) protein (455aa)
MATE efflux family protein n=2 Tax=Clostridiales RepID=D4CGM9_9CLOT
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL36408.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L2_013_000G1_scaffold_575_4
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2463..2972)
DNA (510bp) protein (170aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUW7_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDO60767.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
putative Xre family DNA-binding protein
L2_013_000G1_scaffold_575_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3242..4414
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5L9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38432.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
malic protein NAD-binding protein
L2_013_000G1_scaffold_575_6
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4419..5192
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PS95_CLOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH21749.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
L2_013_000G1_scaffold_575_7
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5235..5558)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CYE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI72291.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_013_000G1_scaffold_575_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5805..6737
DNA (933bp) protein (311aa)
2-keto-myo-inositol dehydratase (EC:4.2.1.44)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1N8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38431.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_013_000G1_scaffold_575_9
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(6788..8206)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45923.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L2_013_000G1_scaffold_575_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(8190..8954)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S500_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45924.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
antimicrobial peptide ABC transporter ATPase
L2_013_000G1_scaffold_575_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9159..9881
DNA (723bp) protein (241aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W005_9CLOT
L2_013_000G1_scaffold_575_12
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9882..10436
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VYU6_9CLOT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
frr; Ribosome-recycling factor
L2_013_000G1_scaffold_575_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10761..11459
DNA (699bp) protein (233aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZJ9_9CLOT
L2_013_000G1_scaffold_575_14
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11483..12325
DNA (843bp) protein (281aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZ72_9CLOT
L2_013_000G1_scaffold_575_15
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12568..13701
DNA (1134bp) protein (378aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3Z7_9CLOT
L2_013_000G1_scaffold_575_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13734..14771
DNA (1038bp) protein (346aa)
RIP metalloprotease RseP n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZZ9_9CLOT
RIP metalloprotease RseP {ECO:0000313|EMBL:EOQ37871.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
membrane-associated zinc metalloprotease
L2_013_000G1_scaffold_575_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14805..15860
DNA (1056bp) protein (352aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VYU2_9CLOT
L2_013_000G1_scaffold_575_18
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15863..20239
DNA (4377bp) protein (1459aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
DNA polymerase III polC-type n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZJ2_9CLOT
DNA polymerase III subunit alpha
L2_013_000G1_scaffold_575_19
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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20264..20608
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KP96_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK99409.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_013_000G1_scaffold_575_20
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20614..21351
DNA (738bp) protein (246aa)
ATPase AAA n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036C668A
AAA domain protein {ECO:0000313|EMBL:EJF42486.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
putative ATP-binding protein
L2_013_000G1_scaffold_575_21
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21355..22320
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2RA11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK65374.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_013_000G1_scaffold_575_22
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22383..24017
DNA (1635bp) protein (545aa)
ATP phosphoribosyltransferase, regulatory subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3Z2_9CLOT
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|SAAS:SAAS00089029}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
ATP phosphoribosyltransferase
L2_013_000G1_scaffold_575_23
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24114..25415
DNA (1302bp) protein (434aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hisD; Histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZZ1_9CLOT
L2_013_000G1_scaffold_575_24
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25402..25977
DNA (576bp) protein (192aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VYT6_9CLOT
L2_013_000G1_scaffold_575_25
unknown

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25978..26202
DNA (225bp) protein (75aa)

This feature has no annotations

L2_013_000G1_scaffold_575_26
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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26199..26576
DNA (378bp) protein (126aa)
Putative fluoride ion transporter CrcB n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TF31_9FIRM
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
CrcB-like protein
L2_013_000G1_scaffold_575_27
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26605..27222
DNA (618bp) protein (206aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZI5_9CLOT
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
L2_013_000G1_scaffold_575_28
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27219..27935
DNA (717bp) protein (239aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZ61_9CLOT
L2_013_000G1_scaffold_575_29
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27966..28730
DNA (765bp) protein (255aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3Y7_9CLOT
Imidazole glycerol phosphate synthase cyclase subunit
L2_013_000G1_scaffold_575_30
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28733..29059
DNA (327bp) protein (109aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|SAAS:SAAS00103216}; EC=3.5.4.19 {ECO:0000256|SAAS:SAAS00103216};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZY6_9CLOT
Displaying items 1-30 of 64 in total

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