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L2_013_000G1_scaffold_611

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_611_1
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..633)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8WDX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ41372.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_013_000G1_scaffold_611_2
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(738..2660)
DNA (1923bp) protein (641aa)
aconitase (EC:4.2.1.3)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W9Y0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ41371.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_013_000G1_scaffold_611_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2875..3900)
DNA (1026bp) protein (342aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W8Y7_9CLOT
L2_013_000G1_scaffold_611_4
unknown

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comp(3905..4156)
DNA (252bp) protein (84aa)

This feature has no annotations

L2_013_000G1_scaffold_611_5
unknown

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comp(4181..4414)
DNA (234bp) protein (78aa)

This feature has no annotations

L2_013_000G1_scaffold_611_6
unknown

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comp(4430..4687)
DNA (258bp) protein (86aa)

This feature has no annotations

L2_013_000G1_scaffold_611_7
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4693..5616)
DNA (924bp) protein (308aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9I7_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEG31897.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
GCN5-related N-acetyltransferase
L2_013_000G1_scaffold_611_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5623..6057)
DNA (435bp) protein (145aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W951_9CLOT
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EOQ41368.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_013_000G1_scaffold_611_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6054..6485)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8WDX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ41367.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_013_000G1_scaffold_611_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6714..9347)
DNA (2634bp) protein (878aa)
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W9X2_9CLOT
DNA polymerase I {ECO:0000313|EMBL:EOQ41366.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_013_000G1_scaffold_611_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9744..10505)
DNA (762bp) protein (254aa)
Sporulation transcription factor Spo0A n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W8Y1_9CLOT
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
response regulator receiver protein
L2_013_000G1_scaffold_611_12
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10669..11628)
DNA (960bp) protein (320aa)
S55 family peptidase (EC:3.4.21.-)
Stage IV sporulation protein B n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W9I4_9CLOT
Stage IV sporulation protein B {ECO:0000313|EMBL:EOQ41364.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_013_000G1_scaffold_611_13
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11865..12617)
DNA (753bp) protein (251aa)
Predicted membrane protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R6N1_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDC30062.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Predicted membrane protein
L2_013_000G1_scaffold_611_14
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12678..13454)
DNA (777bp) protein (259aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
pantothenate kinase, type III (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W2B0_9CLOT
L2_013_000G1_scaffold_611_15
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13522..13875)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2EZK9_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERJ00278.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
Predicted membrane protein
L2_013_000G1_scaffold_611_16
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13916..14368)
DNA (453bp) protein (151aa)
Conserved hypothetical n=4 Tax=Bordetella RepID=K0MZN1_BORBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY75235.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
L2_013_000G1_scaffold_611_17
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14393..14944)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6PZC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD61711.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
transporter
L2_013_000G1_scaffold_611_18
unknown

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comp(14960..15283)
DNA (324bp) protein (108aa)

This feature has no annotations

L2_013_000G1_scaffold_611_19
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15799..17133)
DNA (1335bp) protein (445aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXV6_9CLOT
L2_013_000G1_scaffold_611_20
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17352..18593)
DNA (1242bp) protein (414aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VX23_9CLOT
L2_013_000G1_scaffold_611_21
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18798..19436
DNA (639bp) protein (213aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FDZ4_9FIRM
L2_013_000G1_scaffold_611_22
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19481..20215)
DNA (735bp) protein (245aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=2 Tax=Clostridium RepID=D6DKH0_CLOSC
Methylase involved in ubiquinone/menaquinone biosynthesis
Methyltransferase domain protein {ECO:0000313|EMBL:EFE11129.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_013_000G1_scaffold_611_23
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20202..21035)
DNA (834bp) protein (278aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXK1_9CLOT
L2_013_000G1_scaffold_611_24
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21048..21521)
DNA (474bp) protein (158aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
MJ0936 family phosphodiesterase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXW4_9CLOT
hypothetical protein
L2_013_000G1_scaffold_611_25
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21694..21963
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VX30_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37300.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_013_000G1_scaffold_611_26
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21977..22366
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VYC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37301.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_013_000G1_scaffold_611_27
unknown

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22391..22639
DNA (249bp) protein (83aa)

This feature has no annotations

L2_013_000G1_scaffold_611_28
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22793..23734)
DNA (942bp) protein (314aa)
AP endonuclease, family 2 n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MIT1_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:EFV01177.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
sugar isomerase
L2_013_000G1_scaffold_611_29
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23795..24508)
DNA (714bp) protein (238aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H9Q0_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EJF42068.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L2_013_000G1_scaffold_611_30
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24550..25704)
DNA (1155bp) protein (385aa)
pflD; formate C-acetyltransferase (EC:2.3.1.54)
Formate C-acetyltransferase n=3 Tax=Acidaminococcus RepID=G4Q4X6_ACIIR
Formate C-acetyltransferase {ECO:0000313|EMBL:CDB92855.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
Displaying items 1-30 of 50 in total

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