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L2_013_000G1_scaffold_1028

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1028_1
unknown

Not on your lists

comp(3..110)
DNA (108bp) protein (36aa)

This feature has no annotations

L2_013_000G1_scaffold_1028_2
Bacillus cibi, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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166..387
DNA (222bp) protein (74aa)
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:KEZ49496.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KEZ49496.1};; TaxID=265729 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus cibi.;"
RNA polymerase sigma70 factor n=1 Tax=Caldibacillus debilis RepID=UPI00036C94E4
RNA polymerase factor sigma-70
L2_013_000G1_scaffold_1028_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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468..746
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HKR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26502.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_013_000G1_scaffold_1028_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1031..1231
DNA (201bp) protein (67aa)
Hybrid cluster protein-associated redox disulfide domain protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5D3_9CLOT
Hybrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:EOQ39904.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_013_000G1_scaffold_1028_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1286..1975
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4W3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39903.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_013_000G1_scaffold_1028_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1972..2748
DNA (777bp) protein (259aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W9S7_9CLOT
hypothetical protein
L2_013_000G1_scaffold_1028_7
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2761..4536
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5S9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39901.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
fibronectin-binding protein
L2_013_000G1_scaffold_1028_8
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4533..4745
DNA (213bp) protein (71aa)
Methyltransferase domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VP77_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:CDC05090.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
methyltransferase type 11
L2_013_000G1_scaffold_1028_9
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4761..5330
DNA (570bp) protein (190aa)
Methyltransferase family protein n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5AWV5_EUBCE
Methyltransferase family protein {ECO:0000313|EMBL:EIM58278.1}; TaxID=633697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] cellulosolvens 6.;"
Methyltransferase domain.
L2_013_000G1_scaffold_1028_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5344..5868
DNA (525bp) protein (175aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000256|SAAS:SAAS00054741}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000256|SAAS:SAAS00054755};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Deoxycytidine triphosphate deaminase n=3 Tax=Clostridium RepID=E9SL61_CLOSY
deoxycytidine triphosphate deaminase
L2_013_000G1_scaffold_1028_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5949..6620)
DNA (672bp) protein (224aa)
Metallo-beta-lactamase domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PS54_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFB74485.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Zn-dependent hydrolase, glyoxylase
L2_013_000G1_scaffold_1028_12
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7156..9726
DNA (2571bp) protein (857aa)
Small GTP-binding protein domain protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W200_9CLOT
Small GTP-binding protein domain protein {ECO:0000313|EMBL:EOQ38551.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
small GTP-binding protein domain
L2_013_000G1_scaffold_1028_13
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9796..10224
DNA (429bp) protein (143aa)
Transcriptional regulator BadM/Rrf2 family n=1 Tax=Clostridium sp. CAG:964 RepID=R6VKC8_9CLOT
Transcriptional regulator BadM/Rrf2 family {ECO:0000313|EMBL:CDC82922.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
transcriptional regulator, BadM/Rrf2 family
L2_013_000G1_scaffold_1028_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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10648..11673
DNA (1026bp) protein (342aa)
Transcriptional regulator n=3 Tax=Caldanaerobacter subterraneus RepID=Q8RDH8_THETN
PurR; transcriptional regulator
Periplasmic binding proteins and sugar binding domain of the LacI family, putative {ECO:0000313|EMBL:EEB75806.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. pacificus DSM 12653.;"
L2_013_000G1_scaffold_1028_15
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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11959..13395
DNA (1437bp) protein (479aa)
sugar transporter n=1 Tax=Blautia producta RepID=UPI000373C8DC
Sugar transporter {ECO:0000313|EMBL:EFV22085.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L2_013_000G1_scaffold_1028_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13425..14435
DNA (1011bp) protein (337aa)
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; EC=1.1.1.18 {ECO:0000256|HAMAP-Rule:MF_01671};; EC=1.1.1.369 {ECO:0000256|HAMAP-Rule:MF_01671};; Myo-inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
idh; myo-inositol 2-dehydrogenase (EC:1.1.1.18)
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5U4_9CLOT
L2_013_000G1_scaffold_1028_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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14480..15499
DNA (1020bp) protein (340aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Oscillibacter RepID=U2QT05_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:ERK65581.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
NAD-binding domain-containing oxidoreductase
L2_013_000G1_scaffold_1028_18
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15877..17295)
DNA (1419bp) protein (473aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CRU7_9CLOT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDA79478.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
polysaccharide biosynthesis protein
L2_013_000G1_scaffold_1028_19
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17296..17868)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4S7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39719.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
PAP2 family protein
L2_013_000G1_scaffold_1028_20
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17896..19089)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GJB1_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO35746.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L2_013_000G1_scaffold_1028_21
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19549..21057
DNA (1509bp) protein (503aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
leuA3; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4B8_9CLOT
L2_013_000G1_scaffold_1028_22
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21079..22341
DNA (1263bp) protein (421aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W971_9CLOT
3-isopropylmalate dehydratase, large subunit
L2_013_000G1_scaffold_1028_23
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22358..22849
DNA (492bp) protein (164aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
3-isopropylmalate dehydratase small subunit (EC:4.2.1.35)
3-isopropylmalate dehydratase small subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W584_9CLOT
L2_013_000G1_scaffold_1028_24
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22855..23931
DNA (1077bp) protein (359aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W442_9CLOT
L2_013_000G1_scaffold_1028_25

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24034..24354
DNA (321bp) protein (107aa)
Phage holin n=1 Tax=gut metagenome RepID=J9GTL2_9ZZZZ
Phage holin {ECO:0000313|EMBL:EJX03695.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
L2_013_000G1_scaffold_1028_26
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24521..25258
DNA (738bp) protein (246aa)
UDP-N-acetylmannosamine--N-acetylglucosaminyldiphosphoundecaprenol N-acetylmannosaminyltransferase (EC:2.4.1.187)
WecB/TagA/CpsF family glycosyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4S1_9CLOT
WecB/TagA/CpsF family glycosyltransferase {ECO:0000313|EMBL:EOQ39714.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_013_000G1_scaffold_1028_27
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25262..26038
DNA (777bp) protein (259aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Thymidylate synthase ThyX n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4B4_9CLOT
hypothetical protein
L2_013_000G1_scaffold_1028_28
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26078..26968
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W967_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39712.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_013_000G1_scaffold_1028_29
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26965..27765
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W579_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39711.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Predicted acetyltransferase involved in intracellular survival and related acetyltransferases
L2_013_000G1_scaffold_1028_30
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27781..28332
DNA (552bp) protein (184aa)
DJ-1 family protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W437_9CLOT
DJ-1 family protein {ECO:0000313|EMBL:EOQ39710.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
DJ-1 family protein
Displaying items 1-30 of 38 in total

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