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L2_013_000G1_scaffold_1059

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1059_1
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(1..534)
DNA (534bp) protein (178aa)
Predicted transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S1C2_9FIRM
Predicted transcriptional regulator {ECO:0000313|EMBL:CCZ46843.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L2_013_000G1_scaffold_1059_2
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(631..798)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y8L5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12733.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L2_013_000G1_scaffold_1059_3
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(759..2267)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YAF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12547.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L2_013_000G1_scaffold_1059_4
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2295..3074)
DNA (780bp) protein (260aa)
Recombinase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUG9_9FIRM
Recombinase {ECO:0000313|EMBL:EDN00516.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_013_000G1_scaffold_1059_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3080..4627)
DNA (1548bp) protein (516aa)
Resolvase, N-terminal domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUG8_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDN00515.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
resolvase, n-terminal:recombinase
L2_013_000G1_scaffold_1059_6
unknown

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comp(4689..4838)
DNA (150bp) protein (50aa)

This feature has no annotations

L2_013_000G1_scaffold_1059_7
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4835..6769)
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00512.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Rad3-related DNA helicases
L2_013_000G1_scaffold_1059_8
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7083..7568)
DNA (486bp) protein (162aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MEI0_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS66252.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L2_013_000G1_scaffold_1059_9
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7963..8856)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JQQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63640.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
esterase
L2_013_000G1_scaffold_1059_10
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8927..10216)
DNA (1290bp) protein (430aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HEC3_9CLOT
Di-/tricarboxylate transporter {ECO:0000313|EMBL:ETP72836.1}; Flags: Precursor;; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
Anion permease ArsB/NhaD-like
L2_013_000G1_scaffold_1059_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10606..11226)
DNA (621bp) protein (207aa)
ABC transporter, ATP-binding protein n=2 Tax=Oscillibacter RepID=U2S1B1_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK56602.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L2_013_000G1_scaffold_1059_12
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11223..12167)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A2V7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37405.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
ABC transporter
L2_013_000G1_scaffold_1059_13
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12178..13002)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6P2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37404.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L2_013_000G1_scaffold_1059_14
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12999..13991)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A3F7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37403.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L2_013_000G1_scaffold_1059_15
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14022..15653)
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A8H2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37402.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
ABC-type dipeptide transport system, periplasmic component
L2_013_000G1_scaffold_1059_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15646..16914)
DNA (1269bp) protein (423aa)
UPF0272 protein HMPREF1546_04175 n=2 Tax=Oscillibacter RepID=U2S1B5_9FIRM
UPF0272 protein HMPREF1546_04175 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_013_000G1_scaffold_1059_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16911..17678)
DNA (768bp) protein (256aa)
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2RSU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK56608.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_013_000G1_scaffold_1059_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17689..18438)
DNA (750bp) protein (250aa)
TIGR00268 family protein n=2 Tax=Oscillibacter RepID=U2QK82_9FIRM
TIGR00268 family protein {ECO:0000313|EMBL:ERK56609.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_013_000G1_scaffold_1059_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18734..19513)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W4C8_9CLOT
sulfite exporter TauE/SafE family protein
Sulfite exporter TauE/SafE family protein {ECO:0000313|EMBL:AIY83522.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_1059_20
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19526..20986)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LWR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62988.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Uncharacterized conserved protein (DUF2088).
L2_013_000G1_scaffold_1059_21
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20997..21842)
DNA (846bp) protein (282aa)
Triosephosphate isomerase (EC:5.3.1.1)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30216.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L2_013_000G1_scaffold_1059_22
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21912..22715)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=UPI0003B4D560
Uncharacterized protein {ECO:0000313|EMBL:EOS77948.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
xylose isomerase
L2_013_000G1_scaffold_1059_23
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22729..23430)
DNA (702bp) protein (234aa)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N3Q1_9FIRM
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EOS77949.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
L-ribulose-5-phosphate 4-epimerase
L2_013_000G1_scaffold_1059_24
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23449..24525)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N3Q5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77954.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
putative L-ascorbate-6-phosphate lactonase ulaG
L2_013_000G1_scaffold_1059_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24558..25574)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFB01
Uncharacterized protein {ECO:0000313|EMBL:KIL08059.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
L2_013_000G1_scaffold_1059_26
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(25612..26778)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000376159E
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
L2_013_000G1_scaffold_1059_27
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27262..27969)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N3Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77945.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
transcriptional regulator
L2_013_000G1_scaffold_1059_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28151..29218)
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33691.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative S-layer protein
L2_013_000G1_scaffold_1059_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29272..31224)
DNA (1953bp) protein (651aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO28374.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_013_000G1_scaffold_1059_30
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(31255..33636)
DNA (2382bp) protein (794aa)
Uncharacterized protein n=2 Tax=Firmicutes bacterium ASF500 RepID=V2ZDG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12450.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
TRSE protein
Displaying items 1-30 of 34 in total

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