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L2_013_000G1_scaffold_14

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Displaying items 1-30 of 281 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_14_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(523..1392)
DNA (870bp) protein (290aa)
33 kDa chaperonin n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIM5_9FIRM
hslO; 33 kDa chaperonin
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_14_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1397..2149)
DNA (753bp) protein (251aa)
Methyltransferase type 12 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T685_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06057.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_14_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2149..2451)
DNA (303bp) protein (101aa)
TrpR family protein YerC/YecD n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDE7_9FIRM
TrpR homolog YerC/YecD
TrpR homolog YerC/YecD {ECO:0000313|EMBL:CCO06056.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_14_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2563..3285)
DNA (723bp) protein (241aa)
Probable GTP-binding protein EngB n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2N7_9FIRM
GTPase of unknown function
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_14_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3298..5709)
DNA (2412bp) protein (804aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
lon; ATP-dependent Lon protease (EC:3.4.21.53)
Lon protease n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UA95_9FIRM
L2_013_000G1_scaffold_14_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5870..6115)
DNA (246bp) protein (82aa)
30S ribosomal protein S18 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIL9_9FIRM
rpsR; ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_14_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6162..6686)
DNA (525bp) protein (175aa)
Single-stranded DNA-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T680_9FIRM
ssb; Single-stranded DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_14_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6709..6999)
DNA (291bp) protein (97aa)
30S ribosomal protein S6 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDE1_9FIRM
rpsF; ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_14_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7130..8074)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2N4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67708.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_14_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8234..9352
DNA (1119bp) protein (373aa)
Peptide chain release factor 2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UA90_9FIRM
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
prfB; Peptide chain release factor 2
L2_013_000G1_scaffold_14_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9398..10282)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67706.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_013_000G1_scaffold_14_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10354..10947)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T676_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67705.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_14_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10998..11798)
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
proC; Pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDD6_9FIRM
L2_013_000G1_scaffold_14_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11975..12613)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2N0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06045.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_14_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12871..13833)
DNA (963bp) protein (321aa)
pfkA1; 6-phosphofructokinase (ATP) (EC:2.7.1.11)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
6-phosphofructokinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UA84_9FIRM
L2_013_000G1_scaffold_14_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13963..15789)
DNA (1827bp) protein (609aa)
PASTA domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIK7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06043.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_14_17
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15917..16699)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T671_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67700.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_14_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16828..19065)
DNA (2238bp) protein (746aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase/topoisomerase IV A subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDD2_9FIRM
DNA gyrase/topoisomerase IV A subunit {ECO:0000313|EMBL:CDC67699.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_14_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19071..20195)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67698.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_013_000G1_scaffold_14_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20217..22199)
DNA (1983bp) protein (661aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UA80_9FIRM
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000313|EMBL:CDC67697.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_14_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22411..23175
DNA (765bp) protein (255aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIK2_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06039.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_14_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23369..23869
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T666_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06038.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_14_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23880..24347
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDC8_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06037.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_14_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24347..24553
DNA (207bp) protein (69aa)
Transcriptional regulator XRE family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2M2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06036.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_14_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24947..25375
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UA75_9FIRM
rplM; ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_14_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25392..25793
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UEX5_RUMA7
rpsI; ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_14_27
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25938..27077)
DNA (1140bp) protein (380aa)
Integrase family protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UEY4_RUMA7
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADU22983.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L2_013_000G1_scaffold_14_28
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27156..27845)
DNA (690bp) protein (230aa)
DNA primase n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UEY6_RUMA7
DNA primase
DNA primase {ECO:0000313|EMBL:EXM39648.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
L2_013_000G1_scaffold_14_29
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27845..28117)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UHJ5_RUMA7
Regulatory protein MerR {ECO:0000313|EMBL:EWM53174.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
L2_013_000G1_scaffold_14_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28130..29332)
DNA (1203bp) protein (401aa)
recombinase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37C94
Plasmid recombination enzyme {ECO:0000313|EMBL:ERJ91192.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
plasmid recombination protein
Displaying items 1-30 of 281 in total

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