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L2_013_000G1_scaffold_171

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_171_1
unknown

Not on your lists

comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

L2_013_000G1_scaffold_171_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(324..1727)
DNA (1404bp) protein (468aa)
ntpB; V-type H+-transporting ATPase, subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4L5_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_171_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1724..3487)
DNA (1764bp) protein (588aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309, ECO:0000313|EMBL:CCO05678.1};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ntpA; V-type H+-transporting ATPase, subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGY5_9FIRM
L2_013_000G1_scaffold_171_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3501..4082)
DNA (582bp) protein (194aa)
ntpE; V-type H+-transporting ATPase, subunit E (EC:3.6.3.14)
V-type proton ATPase subunit E n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8M2_9FIRM
V-type proton ATPase subunit E {ECO:0000313|EMBL:CDC67132.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_171_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4102..4371)
DNA (270bp) protein (90aa)
ntpF; V-type H+-transporting ATPase, subunit F (EC:3.6.3.14)
V-type H+-transporting ATPase, subunit F {ECO:0000313|EMBL:CCO05680.1}; EC=3.6.3.14 {ECO:0000313|EMBL:CCO05680.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ATP synthase subunit F n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T114_9FIRM
L2_013_000G1_scaffold_171_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4412..4861)
DNA (450bp) protein (150aa)
ntpK; V-type H+-transporting ATPase, subunit K (EC:3.6.3.14)
V-type H+-transporting ATPase, subunit K {ECO:0000313|EMBL:CCO05681.1}; EC=3.6.3.14 {ECO:0000313|EMBL:CCO05681.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ATP synthase subunit C n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBT1_9FIRM
L2_013_000G1_scaffold_171_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5007..6938)
DNA (1932bp) protein (644aa)
ntpI; V-type H+-transporting ATPase, subunit I (EC:3.6.3.14)
V-type ATPase 116kDa subunit family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4L8_9FIRM
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_171_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6986..8032)
DNA (1047bp) protein (349aa)
ntpC; V-type H+-transporting ATPase, subunit C (EC:3.6.3.14)
V-type H+-transporting ATPase, subunit C {ECO:0000313|EMBL:CCO05683.1}; EC=3.6.3.14 {ECO:0000313|EMBL:CCO05683.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ATP synthase subunit C n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGY8_9FIRM
L2_013_000G1_scaffold_171_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8066..8377)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8M4_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05684.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_171_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8678..9124
DNA (447bp) protein (149aa)
ACT domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T115_9FIRM
ACT domain protein {ECO:0000313|EMBL:CDC67138.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
pheB; ACT domain-containing protein pheB
L2_013_000G1_scaffold_171_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9177..10415
DNA (1239bp) protein (413aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hom; Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBT5_9FIRM
L2_013_000G1_scaffold_171_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10461..10922)
DNA (462bp) protein (154aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05687.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_171_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10967..11440)
DNA (474bp) protein (158aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05688.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_171_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11561..12448
DNA (888bp) protein (296aa)
thrB; Homoserine kinase (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Homoserine kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4M2_9FIRM
L2_013_000G1_scaffold_171_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12445..12987
DNA (543bp) protein (181aa)
tag; DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:CCO05690.1}; EC=3.2.2.20 {ECO:0000313|EMBL:CCO05690.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGZ2_9FIRM
L2_013_000G1_scaffold_171_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13109..13789)
DNA (681bp) protein (227aa)
rpe; Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:CCO05691.1}; EC=5.1.3.1 {ECO:0000313|EMBL:CCO05691.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8M8_9FIRM
L2_013_000G1_scaffold_171_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13819..15678)
DNA (1860bp) protein (620aa)
Teichoic acid biosynthesis protein B family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T119_9FIRM
Putative polyribitolphosphotransferase {ECO:0000313|EMBL:CCO05692.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Putative polyribitolphosphotransferase
L2_013_000G1_scaffold_171_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15789..16862)
DNA (1074bp) protein (358aa)
Sorbitol dehydrogenase (L-iditol 2-dehydrogenase)(Glucitol dehydrogenase) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBT9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05693.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_171_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16877..17581)
DNA (705bp) protein (235aa)
ispD2; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|SAAS:SAAS00030493, ECO:0000313|EMBL:CCO05694.1}; EC=2.7.7.60 {ECO:0000256|SAAS:SAAS00030493, ECO:0000313|EMBL:CCO05694.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4M7_9FIRM
L2_013_000G1_scaffold_171_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17698..18876)
DNA (1179bp) protein (393aa)
Putative CDP-glycerol:glycerophosphate glycerophosphotransferase tarB (EC:2.7.8.-)
Putative CDP-glycerol:glycerophosphate glycerophosphotransferase tarB {ECO:0000313|EMBL:CCO05695.1}; EC=2.7.8.- {ECO:0000313|EMBL:CCO05695.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Putative ribitolphosphotransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGZ4_9FIRM
L2_013_000G1_scaffold_171_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19230..19511
DNA (282bp) protein (94aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05696.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_171_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19839..21662)
DNA (1824bp) protein (608aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
UvrD/REP helicase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S0U2_9FIRM
conserved hypothetical protein
L2_013_000G1_scaffold_171_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21662..23716)
DNA (2055bp) protein (685aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S768_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05698.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_171_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23829..24944)
DNA (1116bp) protein (372aa)
HNH endonuclease domain protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05699.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_171_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24951..26027)
DNA (1077bp) protein (359aa)
modification methylase (adenine-specificmethyltransferase) (EC:2.1.1.72)
Modification methylase (Adenine-specificmethyltransferase) {ECO:0000313|EMBL:CCO05700.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CCO05700.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KLS6_9FIRM
L2_013_000G1_scaffold_171_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26170..26529
DNA (360bp) protein (120aa)
Predicted transcriptional regulators n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQM2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05701.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_171_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26628..27569
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J2V2_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05703.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_171_28
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27620..27844)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37C93
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05704.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_171_29
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27978..28835)
DNA (858bp) protein (286aa)
recombinase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37C94
Plasmid recombination enzyme {ECO:0000313|EMBL:EGC04703.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
plasmid recombination protein
L2_013_000G1_scaffold_171_30
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28849..29271)
DNA (423bp) protein (141aa)
recombinase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37C94
Plasmid recombination protein {ECO:0000313|EMBL:CCY20836.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
plasmid recombination protein
Displaying items 1-30 of 102 in total

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