ggKbase home page

L2_013_000G1_scaffold_280

Search features with annotation key words

Displaying items 61-73 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_280_61
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72782..73447)
DNA (666bp) protein (222aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI73_9FIRM
sigF; RNA polymerase sigma-F factor
RNA polymerase sigma-F factor {ECO:0000313|EMBL:CCO04141.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_280_62
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(73449..73865)
DNA (417bp) protein (139aa)
spoIIAB; Anti-sigma F factor (EC:2.7.11.1)
Anti-sigma regulatory factor serine/threonine protein kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9T0_9FIRM
Anti-sigma regulatory factor serine/threonine protein kinase {ECO:0000313|EMBL:CDC67517.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_280_63
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(73870..74286)
DNA (417bp) protein (139aa)
Anti-sigma factor antagonist n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T296_9FIRM
spoIIAA; Anti-sigma F factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_280_64
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(74456..75466)
DNA (1011bp) protein (337aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCX9_9FIRM
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDC67519.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_280_65
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

75637..76506
DNA (870bp) protein (290aa)
Transcriptional regulator AraC family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5Q7_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04137.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_280_66
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

76555..77139
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI75_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04136.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_280_67
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

77218..78165
DNA (948bp) protein (316aa)
Putative bactoprenol glucosyl transferase-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9T4_9FIRM
Glycosyltransferase Family 2 protein
Glycosyltransferase Family 2 protein {ECO:0000313|EMBL:CCO04134.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_280_68
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

78152..81100
DNA (2949bp) protein (983aa)
Bacterial membrane protein YfhO n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T299_9FIRM
Bacterial membrane protein YfhO {ECO:0000313|EMBL:CDC67523.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Putative membrane protein
L2_013_000G1_scaffold_280_69
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

81233..82054
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCY1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04132.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_280_70
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82130..82420)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5R2_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04131.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_280_71
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82553..83272)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67526.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L2_013_000G1_scaffold_280_72
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(83296..83823)
DNA (528bp) protein (176aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9T9_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04129.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_280_73
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

84202..85095
DNA (894bp) protein (298aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2A3_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04128.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying items 61-73 of 73 in total

View Taxonomy