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L2_013_000G1_scaffold_890

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_890_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(929..1666)
DNA (738bp) protein (246aa)
RNA polymerase sigma-70 factor n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2D2_9FIRM
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDC67563.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_890_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1663..2814)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67562.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_890_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3405..5222
DNA (1818bp) protein (606aa)
TOPRIM domain-containing protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIA1_9FIRM
TOPRIM domain-containing protein {ECO:0000313|EMBL:CDC67561.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_013_000G1_scaffold_890_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5598..6005
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5U5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67560.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_013_000G1_scaffold_890_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6008..6421
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TD13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67559.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_013_000G1_scaffold_890_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6683..6877
DNA (195bp) protein (65aa)
DNA binding domain protein excisionase family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2C7_9FIRM
DNA binding domain protein excisionase family {ECO:0000313|EMBL:CDC67558.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_890_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7003..8277
DNA (1275bp) protein (425aa)
Site-specific recombinase phage integrase family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9W3_9FIRM
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDC67557.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Phage integrase
L2_013_000G1_scaffold_890_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8916..10976
DNA (2061bp) protein (687aa)
ppk1; Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Polyphosphate kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI98_9FIRM
L2_013_000G1_scaffold_890_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10973..11887
DNA (915bp) protein (305aa)
CorA-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5U0_9FIRM
CorA-like protein {ECO:0000313|EMBL:CDC67555.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Putative magnesium and cobalt transport protein
L2_013_000G1_scaffold_890_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11896..12375
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TD08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67554.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_890_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12401..13843
DNA (1443bp) protein (481aa)
proS; Prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571, ECO:0000313|EMBL:CCO04103.1};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Proline--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2C2_9FIRM
L2_013_000G1_scaffold_890_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13920..14945)
DNA (1026bp) protein (342aa)
CAAX amino terminal protease family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9V9_9FIRM
CAAX amino terminal protease family protein
CAAX amino terminal protease family protein {ECO:0000313|EMBL:CCO04104.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_890_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15198..17087
DNA (1890bp) protein (630aa)
Chaperone protein HtpG n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI95_9FIRM
htpG; Chaperone protein HtpG
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_890_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17422..18258
DNA (837bp) protein (279aa)
Transcription antiterminator LicT n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5T5_9FIRM
Transcription antiterminator LicT {ECO:0000313|EMBL:CDC67550.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
arbG; Beta-glucoside operon antiterminator
L2_013_000G1_scaffold_890_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18366..20519
DNA (2154bp) protein (718aa)
ptsG; PTS system, glucose-specific IIABC component (EC:2.7.1.69)
PTS system, glucose-specific IIABC component {ECO:0000313|EMBL:CCO04107.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CCO04107.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
PTS system glucose subfamily IIA component n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TD05_9FIRM
L2_013_000G1_scaffold_890_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20539..20796
DNA (258bp) protein (86aa)
ptsH1; Phosphocarrier protein HPr (EC:2.7.11.-)
Phosphotransferase System HPr (HPr) Family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2B7_9FIRM
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CDC67548.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_890_17
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20930..22564
DNA (1635bp) protein (545aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ptsI1; Phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9V5_9FIRM
L2_013_000G1_scaffold_890_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22785..23345
DNA (561bp) protein (187aa)
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI92_9FIRM
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CDC67546.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
sig7; RNA polymerase sigma factor
L2_013_000G1_scaffold_890_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23338..24141
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67545.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_890_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24193..25815
DNA (1623bp) protein (541aa)
von Willebrand factor type A domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TD01_9FIRM
von Willebrand factor type A domain protein {ECO:0000313|EMBL:CDC67544.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L2_013_000G1_scaffold_890_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25969..26424
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2B5_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCO04113.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_890_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26421..27125
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9V0_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04114.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_890_23
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27191..27985)
DNA (795bp) protein (265aa)
ABC transporter ATPase component (EC:3.6.3.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67541.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_890_24
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27996..28967)
DNA (972bp) protein (324aa)
ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5S5_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDC67540.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ABC transporter membrane component
L2_013_000G1_scaffold_890_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29054..30076)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCZ6_9FIRM
ABC transporter extracellular-binding protein
ABC transporter extracellular-binding protein {ECO:0000313|EMBL:CCO04117.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_890_26
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30295..32685
DNA (2391bp) protein (797aa)
Spore coat protein CotH n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2B1_9FIRM
Spore coat protein CotH {ECO:0000313|EMBL:CDC67538.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L2_013_000G1_scaffold_890_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32738..33928)
DNA (1191bp) protein (397aa)
Putative metallophosphoesterase (EC:3.1.-.-)
Putative metallophosphoesterase {ECO:0000313|EMBL:CCO04119.1}; EC=3.1.-.- {ECO:0000313|EMBL:CCO04119.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9U6_9FIRM
L2_013_000G1_scaffold_890_28
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34008..35114)
DNA (1107bp) protein (369aa)
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI86_9FIRM
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control {ECO:0000313|EMBL:CDC67536.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L2_013_000G1_scaffold_890_29
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35231..36541)
DNA (1311bp) protein (437aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5S2_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDC67535.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L2_013_000G1_scaffold_890_30
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36851..37777
DNA (927bp) protein (309aa)
Transcriptional regulator LysR family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCZ2_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCO04122.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying items 1-30 of 35 in total

View Taxonomy