ggKbase home page

L2_013_000G1_scaffold_2248

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2248_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(113..2734)
DNA (2622bp) protein (874aa)
ATP-dependent chaperone ClpB n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYM2_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
clpB; Chaperone protein ClpB
L2_013_000G1_scaffold_2248_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2802..3512)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U616_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66292.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_2248_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3691..4344
DNA (654bp) protein (218aa)
HAD hydrolase family IA variant 3 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEJ5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06068.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2248_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4594..5727)
DNA (1134bp) protein (378aa)
dacC; D-alanyl-D-alanine carboxypeptidase (pbp 5/6) (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase (Pbp 5/6) {ECO:0000313|EMBL:CCO06067.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CCO06067.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T261_9FIRM
L2_013_000G1_scaffold_2248_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5754..6209)
DNA (456bp) protein (152aa)
CBS domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9A2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06066.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2248_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6363..7271)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66288.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_2248_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7556..8485
DNA (930bp) protein (310aa)
Transporter auxin efflux carrier (AEC) family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U612_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06064.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2248_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8921..9607)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEI9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06063.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2248_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9713..10249)
DNA (537bp) protein (179aa)
wrbA; hypothetical protein (EC:1.7.-.-)
Multimeric flavodoxin WrbA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T257_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO06062.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2248_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10266..12017)
DNA (1752bp) protein (584aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
dxs2; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
Putative 1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T997_9FIRM
L2_013_000G1_scaffold_2248_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12252..12437
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYL0_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06060.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2248_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12434..13159)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U609_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06059.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2248_13
unknown

Not on your lists

comp(13104..13283)
DNA (180bp) protein (60aa)

This feature has no annotations

L2_013_000G1_scaffold_2248_14
unknown

Not on your lists

comp(13654..14562)
DNA (909bp) protein (303aa)

This feature has no annotations

L2_013_000G1_scaffold_2248_15
Geobacillus sp. WCH70, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14629..16491)
DNA (1863bp) protein (621aa)
ATP-dependent OLD family endonuclease n=1 Tax=Geobacillus sp. (strain WCH70) RepID=C5DA37_GEOSW
ATP-dependent OLD family endonuclease
ATP-dependent OLD family endonuclease {ECO:0000313|EMBL:ACS24151.1}; TaxID=471223 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. (strain WCH70).;"
L2_013_000G1_scaffold_2248_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16645..17430)
DNA (786bp) protein (262aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9YZ70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13057.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_013_000G1_scaffold_2248_17
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17423..18031)
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R7PNZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF26097.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L2_013_000G1_scaffold_2248_18
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18254..19747)
DNA (1494bp) protein (498aa)
dgt; deoxyguanosinetriphosphate triphosphohydrolase Dgt (EC:3.1.5.1)
Putative dGTPase n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XPY8_DESHA
Putative dGTPase {ECO:0000313|EMBL:EHL06282.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
Displaying 18 items

View Taxonomy