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L2_013_000G1_scaffold_2269

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2269_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..492)
DNA (492bp) protein (164aa)
vanY1; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CCO04227.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CCO04227.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Ruminococcus albus 8 RepID=E9SD68_RUMAL
L2_013_000G1_scaffold_2269_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(582..1586)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAF9_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04228.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2269_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1570..2331)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U785_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04229.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2269_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2392..2811
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFK7_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC66666.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_2269_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2967..5006)
DNA (2040bp) protein (680aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T396_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66665.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_2269_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5210..5584)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAF4_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04232.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2269_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5598..6284)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZP6_9FIRM
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCO04233.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2269_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6395..7894
DNA (1500bp) protein (500aa)
Putative spore germination protein KA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U779_9FIRM
Putative spore germination protein KA {ECO:0000313|EMBL:CDC66662.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
grkA; Spore germination protein KA
L2_013_000G1_scaffold_2269_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7891..8958
DNA (1068bp) protein (356aa)
Spore germination protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFK3_9FIRM
putative Spore germination protein AB
Putative Spore germination protein AB {ECO:0000313|EMBL:CCO04235.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2269_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8945..10090
DNA (1146bp) protein (382aa)
Germination protein Ger(X)C family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAE9_9FIRM
spore germination protein KC
Spore germination protein KC {ECO:0000313|EMBL:CCO04236.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2269_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10071..10916)
DNA (846bp) protein (282aa)
pseudouridine synthase (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZP0_9FIRM
Pseudouridine synthase RluA family {ECO:0000313|EMBL:CDC66658.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_2269_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10913..11746)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U774_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04238.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2269_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11791..12450)
DNA (660bp) protein (220aa)
cobC; alpha-ribazole phosphatase (EC:3.1.3.73)
Alpha-ribazole phosphatase {ECO:0000313|EMBL:CCO04240.1}; EC=3.1.3.73 {ECO:0000313|EMBL:CCO04240.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Phosphoglycerate mutase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T387_9FIRM
L2_013_000G1_scaffold_2269_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12624..13217
DNA (594bp) protein (198aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAE5_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC66654.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_2269_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13293..14288
DNA (996bp) protein (332aa)
Membrane-associated lipoprotein involved in thiamine biosynthesis n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZN5_9FIRM
Membrane-associated lipoprotein involved in thiamine biosynthesis {ECO:0000313|EMBL:CDC66653.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
apbE family protein
L2_013_000G1_scaffold_2269_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14316..15620
DNA (1305bp) protein (435aa)
Electron transport complex protein RnfC n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U770_9FIRM
rnfC; Electron transport complex protein RnfC
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2269_17
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15635..16576
DNA (942bp) protein (314aa)
Electron transport complex RnfABCDGE type D subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFJ7_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
rnfD; Electron transport complex protein RnfD
L2_013_000G1_scaffold_2269_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16573..17133
DNA (561bp) protein (187aa)
Predicted NADH:ubiquinone oxidoreductase subunit RnfG n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T381_9FIRM
Predicted NADH:ubiquinone oxidoreductase subunit RnfG {ECO:0000313|EMBL:CDC66650.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
rnfG; Electron transport complex protein rnfG
L2_013_000G1_scaffold_2269_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17126..17809
DNA (684bp) protein (228aa)
Electron transport complex RnfABCDGE type E subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAE0_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
rnfE; Electron transport complex protein RnfE
L2_013_000G1_scaffold_2269_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17812..18381
DNA (570bp) protein (190aa)
Electron transport complex RnfABCDGE type A subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZN2_9FIRM
rnfA; Electron transport complex protein RnfA
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_2269_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18397..19596
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U767_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66647.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
Displaying 21 items

View Taxonomy