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L2_013_000G1_scaffold_1387

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1387_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(177..2354)
DNA (2178bp) protein (726aa)
Polysaccharide biosynthesis protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1B0_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDC67263.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
capD; polysaccharide biosynthesis protein CapD-like
L2_013_000G1_scaffold_1387_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2396..3100)
DNA (705bp) protein (235aa)
capC; Tyrosine-protein phosphatase (EC:3.1.3.48)
Tyrosine-protein phosphatase {ECO:0000313|EMBL:CCO04980.1}; EC=3.1.3.48 {ECO:0000313|EMBL:CCO04980.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Capsular polysaccharide biosynthesis protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TC50_9FIRM
L2_013_000G1_scaffold_1387_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3120..4613)
DNA (1494bp) protein (498aa)
epsB; tyrosine-protein kinase (EC:2.7.10.1)
Capsular exopolysaccharide family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4X7_9FIRM
Capsular exopolysaccharide family {ECO:0000313|EMBL:CDC67265.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_1387_4
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4828..5388)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003788620
MATE efflux family protein {ECO:0000313|EMBL:EOS32405.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
L2_013_000G1_scaffold_1387_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5475..7550)
DNA (2076bp) protein (692aa)
Glycoside Hydrolase Family 3 protein (EC:3.2.1.-)
Glycoside Hydrolase Family 3 protein {ECO:0000313|EMBL:CCO04977.1}; EC=3.2.1.- {ECO:0000313|EMBL:CCO04977.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Xyl3A n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THA3_9FIRM
L2_013_000G1_scaffold_1387_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7935..8537
DNA (603bp) protein (201aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8Y0_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC67267.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_1387_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8541..9296
DNA (756bp) protein (252aa)
Sortase family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1B4_9FIRM
Sortase family protein {ECO:0000313|EMBL:CDC67268.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
yhcS; Uncharacterized protein YhcS-like
L2_013_000G1_scaffold_1387_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9310..10212
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TC53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67269.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_1387_9

Not on your lists

10362..11093
DNA (732bp) protein (244aa)
Transposase IS116/IS110/IS902 family protein n=2 Tax=human gut metagenome RepID=K1SG92_9ZZZZ
Uncultured bacterium extrachromosomal DNA RGI01311 {ECO:0000313|EMBL:CDL66432.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
IS110, transposase
L2_013_000G1_scaffold_1387_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11332..13542)
DNA (2211bp) protein (737aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JNN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO04971.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
hypothetical protein
L2_013_000G1_scaffold_1387_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13555..14412)
DNA (858bp) protein (286aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC transporter ATPase component {ECO:0000313|EMBL:CCO04970.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO04970.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6CUD4_9CLOT
L2_013_000G1_scaffold_1387_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14429..15997)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2D4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCO04969.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
hypothetical protein
L2_013_000G1_scaffold_1387_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16012..17175)
DNA (1164bp) protein (388aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04968.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1387_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17261..17629)
DNA (369bp) protein (123aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04967.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1387_15
unknown

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comp(17812..17946)
DNA (135bp) protein (45aa)

This feature has no annotations

L2_013_000G1_scaffold_1387_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17943..18518)
DNA (576bp) protein (192aa)
Putative AIP processing-secretion protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T197_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04966.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1387_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18737..19927)
DNA (1191bp) protein (397aa)
Histidine kinase-DNA gyrase B-and HSP90-like ATPase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8W0_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04965.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1387_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19938..20399)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Bacillus thuringiensis (strain Al Hakam) RepID=A0RJQ0_BACAH
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04964.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1387_19
unknown

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comp(20449..20565)
DNA (117bp) protein (39aa)

This feature has no annotations

L2_013_000G1_scaffold_1387_20
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20587..21018)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4R7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51967.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L2_013_000G1_scaffold_1387_21
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21095..21529)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4Q1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51951.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L2_013_000G1_scaffold_1387_22
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21553..22311)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4Q2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EWM52145.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
L2_013_000G1_scaffold_1387_23
unknown

Not on your lists

comp(22274..22390)
DNA (117bp) protein (39aa)

This feature has no annotations

L2_013_000G1_scaffold_1387_24
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22401..22643)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QSM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38870.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L2_013_000G1_scaffold_1387_25
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22650..23432)
DNA (783bp) protein (261aa)
Intein C-terminal splicing region n=1 Tax=Clostridium sp. L2-50 RepID=A7VI55_9CLOT
Intein C-terminal splicing region {ECO:0000313|EMBL:EDO56914.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L2_013_000G1_scaffold_1387_26
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23448..23720)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5UX25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ82863.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
L2_013_000G1_scaffold_1387_27
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23740..24231)
DNA (492bp) protein (164aa)
Intein C-terminal splicing region n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5VQK5_9FIRM
Intein C-terminal splicing region {ECO:0000313|EMBL:CCZ82862.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
Rhs family protein
L2_013_000G1_scaffold_1387_28
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24432..24980)
DNA (549bp) protein (183aa)
Conserved domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9SF21_RUMAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04648.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1387_29
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24955..25452)
DNA (498bp) protein (166aa)
MchA1 n=4 Tax=Moraxella catarrhalis RepID=A5J2A2_MORCA
MchA1 {ECO:0000313|EMBL:ABI85300.1}; TaxID=480 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella catarrhalis.;"
hypothetical protein
L2_013_000G1_scaffold_1387_30
Vibrio caribbeanicus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25569..25955)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Vibrio caribbenthicus ATCC BAA-2122 RepID=E3BGP5_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:EFP97769.1}; TaxID=796620 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio caribbeanicus ATCC BAA-2122.;"
Displaying items 1-30 of 34 in total

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