ggKbase home page

L2_013_000G1_scaffold_1640

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1640_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..228)
DNA (228bp) protein (76aa)
GTP-binding protein TypA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAG6_9FIRM
typA; GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:CDC64841.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_1640_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

671..1819
DNA (1149bp) protein (383aa)
lactal_redase; lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase {ECO:0000313|EMBL:CCO04588.1}; EC=1.1.1.77 {ECO:0000313|EMBL:CCO04588.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Lactaldehyde reductase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SUA9_9FIRM
L2_013_000G1_scaffold_1640_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1972..2652
DNA (681bp) protein (227aa)
Two component transcriptional regulator winged helix family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAG1_9FIRM
Response regulator
Response regulator {ECO:0000313|EMBL:CCO04587.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1640_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2645..3949
DNA (1305bp) protein (435aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9SCV5_RUMAL
histidine kinase
Histidine kinase {ECO:0000313|EMBL:CCO04586.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1640_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4089..5036
DNA (948bp) protein (316aa)
ABC transporter related protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAR2_9FIRM
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCO04585.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1640_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5041..6162
DNA (1122bp) protein (374aa)
ABC-2 type transporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TJ48_9FIRM
Putative ABC transporter membrane component
Putative ABC transporter membrane component {ECO:0000313|EMBL:CCO04584.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1640_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6149..7315
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7GW58_9FIRM
putative ABC transporter membrane component
Putative ABC transporter membrane component {ECO:0000313|EMBL:CCO04583.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1640_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7421..8476
DNA (1056bp) protein (352aa)
GDSL-like Lipase/Acylhydrolase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6M0_9FIRM
GDSL-like Lipase/Acylhydrolase {ECO:0000313|EMBL:CDC67870.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Carbohydrate Esterase Family 2 protein
L2_013_000G1_scaffold_1640_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8594..9958)
DNA (1365bp) protein (455aa)
Permeases n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDT4_9FIRM
putative permease
Putative permease {ECO:0000313|EMBL:CCO04581.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1640_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10076..11695)
DNA (1620bp) protein (540aa)
Dockerin type I repeat protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T366_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04580.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1640_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11806..12801
DNA (996bp) protein (332aa)
Aldo/keto reductase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAQ7_9FIRM
Aldo-keto reductase
Aldo-keto reductase {ECO:0000313|EMBL:CCO04579.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1640_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12839..14014)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TJ42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67866.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
alcohol dehydrogenase
L2_013_000G1_scaffold_1640_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14289..15212
DNA (924bp) protein (308aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6L6_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC67865.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_013_000G1_scaffold_1640_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15328..17940)
DNA (2613bp) protein (871aa)
putative permease (EC:3.6.3.-)
Putative permease {ECO:0000313|EMBL:CCO04575.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO04575.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
X-X-X-Leu-X-X-Gly heptad repeats n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDS9_9FIRM
L2_013_000G1_scaffold_1640_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17940..18641)
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T360_9FIRM
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCO04574.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1640_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18795..19421)
DNA (627bp) protein (209aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAQ1_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDC67862.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Transcriptional regulator, TetR family
L2_013_000G1_scaffold_1640_17
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19567..19881
DNA (315bp) protein (105aa)
Cellulase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TJ36_9FIRM
Cellulase {ECO:0000313|EMBL:CDC67861.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
cel; cellulase
L2_013_000G1_scaffold_1640_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20331..21326)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CK77_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04571.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1640_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21335..21529)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U3A7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65327.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_1640_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21544..22476)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65329.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_1640_21
unknown

Not on your lists

comp(22473..22637)
DNA (165bp) protein (55aa)

This feature has no annotations

L2_013_000G1_scaffold_1640_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22764..23885)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65331.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_1640_23
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23924..24181)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SVS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65333.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_1640_24
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24241..24675)
DNA (435bp) protein (145aa)
Cellulose-binding family II n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZC3_9FIRM
Cellulose-binding family II {ECO:0000313|EMBL:CDC65335.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Mg-chelatase subunit ChlD
L2_013_000G1_scaffold_1640_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24796..25005)
DNA (210bp) protein (70aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04568.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying 25 items

View Taxonomy