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L2_013_000G1_scaffold_1823

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1823_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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715..3633
DNA (2919bp) protein (973aa)
ABC transporter permease/ATP-binding protein (EC:3.6.3.-)
ABC transporter related protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SU88_9FIRM
ABC transporter related protein {ECO:0000313|EMBL:CDC64818.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_1823_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3664..3768
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4Y4_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05311.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1823_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4019..4693
DNA (675bp) protein (225aa)
Two component transcriptional regulator winged helix family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SXV1_9FIRM
Two-component system transcriptional regulator
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CDC64820.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_1823_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4677..6221
DNA (1545bp) protein (515aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Two-component system sensor histidine kinase (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAE4_9FIRM
L2_013_000G1_scaffold_1823_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6935..7402)
DNA (468bp) protein (156aa)
SsrA-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U1S4_9FIRM
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_1823_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7619..8986
DNA (1368bp) protein (456aa)
Putative efflux protein MATE family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SU94_9FIRM
multidrug resistance protein, MATE family, drug/sodium antiporter
Multidrug resistance protein, MATE family,drug/sodium antiporter {ECO:0000313|EMBL:CCO05263.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1823_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9578..10204)
DNA (627bp) protein (209aa)
Putative membrane protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SXV6_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDC64825.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_013_000G1_scaffold_1823_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10391..11290)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U1T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC64827.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_013_000G1_scaffold_1823_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11604..12629)
DNA (1026bp) protein (342aa)
HRDC domain protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MM57_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05260.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1823_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12965..13591
DNA (627bp) protein (209aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1Z4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05258.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1823_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13570..13875
DNA (306bp) protein (102aa)
AAA domain protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CKV1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05257.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1823_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14136..14927)
DNA (792bp) protein (264aa)
hypothetical protein (EC:2.1.1.-)
O-Methyltransferase involved in polyketide biosynthesis n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5V9_9FIRM
O-Methyltransferase involved in polyketide biosynthesis {ECO:0000313|EMBL:CDC66222.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_1823_13
unknown

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15002..15094
DNA (93bp) protein (31aa)

This feature has no annotations

L2_013_000G1_scaffold_1823_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15110..15742)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAQ0_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05251.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1823_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15835..16563)
DNA (729bp) protein (243aa)
Ser/Thr phosphatase family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1Z9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05250.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1823_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16847..17974)
DNA (1128bp) protein (376aa)
HTH domain-containing protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CND1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05248.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1823_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18228..18713
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T956_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05247.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1823_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19211..20539)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T214_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC66240.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_000G1_scaffold_1823_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20558..21382)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEE3_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05245.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1823_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21379..22281)
DNA (903bp) protein (301aa)
LysR substrate binding domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5X7_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:CDC66242.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Transcriptional regulator, LysR family
L2_013_000G1_scaffold_1823_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22417..23130
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYH3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05243.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_1823_22
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23259..23435
DNA (177bp) protein (59aa)
Carbohydrate Esterase Family 1 protein (EC:3.1.-.-)
Predicted esterase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T961_9FIRM
Predicted esterase {ECO:0000313|EMBL:CDA74229.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
Displaying 22 items

View Taxonomy