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L2_013_000G1_scaffold_4647

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_4647_1
unknown

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comp(104..349)
DNA (246bp) protein (82aa)

This feature has no annotations

L2_013_000G1_scaffold_4647_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(572..2236)
DNA (1665bp) protein (555aa)
Site-specific recombinases, DNA invertase Pin homologs n=2 Tax=Ruminococcus RepID=D4LEK4_RUMC1
Site-specific DNA recombinase {ECO:0000313|EMBL:CCO03895.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Site-specific DNA recombinase
L2_013_000G1_scaffold_4647_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2330..2527)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CND9_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03894.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_4647_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2666..3064)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R6CCL2_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03893.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_4647_5
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4012..4683
DNA (672bp) protein (224aa)
AT hook motif n=2 Tax=Ruminococcus RepID=D4LEK7_RUMC1
unnamed protein product
AT hook motif {ECO:0000313|EMBL:CDA74362.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L2_013_000G1_scaffold_4647_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4680..6170
DNA (1491bp) protein (497aa)
Relaxase/Mobilisation nuclease domain n=2 Tax=Ruminococcus RepID=D4LEK8_RUMC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO03890.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_4647_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6189..6782
DNA (594bp) protein (198aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LEK9_RUMC1
Transposon resolvase
Transposon resolvase {ECO:0000313|EMBL:CCO03889.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_000G1_scaffold_4647_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7114..7395)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C3790A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10057.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_013_000G1_scaffold_4647_9
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7447..8676)
DNA (1230bp) protein (410aa)
type II R-M system restriction endonuclease n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37909
Uncharacterized protein {ECO:0000313|EMBL:CDC28722.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_013_000G1_scaffold_4647_10
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8678..9778)
DNA (1101bp) protein (367aa)
Site-specific DNA methylase (EC:2.1.1.37)
DNA methyltransferase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37908
Cytosine-specific methyltransferase {ECO:0000313|EMBL:CDC28724.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Displaying 10 items

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