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L2_013_014G1_scaffold_38

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_014G1_scaffold_38_1
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(373..1137)
DNA (765bp) protein (255aa)
Exopolysaccharide biosynthesis protein n=3 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2SDP1_LACPA
Exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EPC87494.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
epsB; exopolysaccharide biosynthesis protein
L2_013_014G1_scaffold_38_2
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1152..2081)
DNA (930bp) protein (310aa)
Exopolysaccharide biosynthesis protein n=6 Tax=Lactobacillus casei group RepID=K0N6Y4_LACCA
Exopolysaccharide biosynthesis protein
Exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:CCK23137.1}; TaxID=1215914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei W56.;"
L2_013_014G1_scaffold_38_3
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2441..3160
DNA (720bp) protein (240aa)
Uncharacterized protein n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2NMN4_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC41994.1}; TaxID=1256199 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp74.;"
hypothetical protein
L2_013_014G1_scaffold_38_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3138..3302)
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2NS81_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC37616.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
hypothetical protein
L2_013_014G1_scaffold_38_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3443..3943)
DNA (501bp) protein (167aa)
Predicted membrane protein n=19 Tax=Lactobacillus casei group RepID=D8GAB7_LACCZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC89841.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L2_013_014G1_scaffold_38_6
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4054..4767)
DNA (714bp) protein (238aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
Short-chain alcohol dehydrogenase n=1 Tax=Lactobacillus casei (strain ATCC 334) RepID=Q036R2_LACC3
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:ABJ70810.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_013_014G1_scaffold_38_7
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4764..4988)
DNA (225bp) protein (75aa)
Uncharacterized protein n=35 Tax=Lactobacillus casei group RepID=K0N6Z7_LACCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN72298.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
L2_013_014G1_scaffold_38_8
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5258..5584)
DNA (327bp) protein (109aa)
Transcriptional regulator, xre family n=42 Tax=Lactobacillus casei group RepID=B3W9D8_LACCB
Transcriptional regulator, MerR family
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEI68508.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L2_013_014G1_scaffold_38_9
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5844..6482)
DNA (639bp) protein (213aa)
Phosphoglycerate mutase n=12 Tax=Lactobacillus casei group RepID=C5F8E1_LACPA
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:GAN36048.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L2_013_014G1_scaffold_38_10
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6791..7768)
DNA (978bp) protein (326aa)
Oligopeptide ABC transporter, ATP-binding subunit n=21 Tax=Lactobacillus casei group RepID=B3W9E0_LACCB
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEI68506.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L2_013_014G1_scaffold_38_11
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7770..8822)
DNA (1053bp) protein (351aa)
Oligopeptide ABC transporter, ATP-binding subunit n=46 Tax=Lactobacillus casei group RepID=B3W9E1_LACCB
oppD_3; oligopeptide transport ATP-binding protein OppD
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component {ECO:0000313|EMBL:ABJ70815.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_013_014G1_scaffold_38_12
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8834..9832)
DNA (999bp) protein (333aa)
Oligopeptide transport system permease protein oppC n=56 Tax=Lactobacillus RepID=K0N706_LACCA
oligopeptide transport system permease protein
Oligopeptide ABC transporter, permease protein OppC {ECO:0000313|EMBL:EPC37625.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
L2_013_014G1_scaffold_38_13
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9832..10755)
DNA (924bp) protein (308aa)
Oligopeptide transport system permease protein oppB n=51 Tax=Lactobacillus casei group RepID=K0N6G2_LACCA
Oligopeptide transport system permease protein OppB
Oligopeptide transport system permease protein {ECO:0000313|EMBL:EKQ10106.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
L2_013_014G1_scaffold_38_14
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10930..12552)
DNA (1623bp) protein (541aa)
Oligopeptide ABC transporter n=23 Tax=Lactobacillus casei group RepID=C5F8E6_LACPA
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ERN48907.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
oligopeptide ABC transporter
L2_013_014G1_scaffold_38_15
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12984..14414)
DNA (1431bp) protein (477aa)
Efflux pump antibiotic resistance protein n=15 Tax=Lactobacillus casei group RepID=D8GAC8_LACCZ
efflux pump antibiotic resistance protein
Efflux pump antibiotic resistance protein {ECO:0000313|EMBL:EPC37628.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
L2_013_014G1_scaffold_38_16
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14947..15510)
DNA (564bp) protein (188aa)
Elongation factor P n=54 Tax=Lactobacillus casei group RepID=B3W9E7_LACCB
elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L2_013_014G1_scaffold_38_17
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16322..17029)
DNA (708bp) protein (236aa)
Uncharacterized protein n=10 Tax=Lactobacillus casei group RepID=S2LY82_LACPA
putative L-lactate dehydrogenase subunit
Lactate utilization protein C {ECO:0000313|EMBL:EPC90313.1}; TaxID=1256211 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei CNCM I-4649.;"
L2_013_014G1_scaffold_38_18
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17022..18506)
DNA (1485bp) protein (495aa)
Iron-binding oxidase subunit n=17 Tax=Lactobacillus casei group RepID=C5F8F0_LACPA
iron-binding oxidase subunit
Putative L-lactate dehydrogenase Fe-S cluster-binding subunit {ECO:0000313|EMBL:EKQ09030.1}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
L2_013_014G1_scaffold_38_19
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18503..19285)
DNA (783bp) protein (261aa)
Oxidoreductase n=35 Tax=Lactobacillus casei group RepID=B3W9F0_LACCB
Putative Fe-S oxidoreductase
Lactate utilization protein A {ECO:0000313|EMBL:EPC59915.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
L2_013_014G1_scaffold_38_20
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19756..20322
DNA (567bp) protein (189aa)
Uncharacterized protein n=42 Tax=Lactobacillus casei group RepID=C5F8F2_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC87175.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L2_013_014G1_scaffold_38_21
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20574..20909)
DNA (336bp) protein (112aa)
licA_4; Lichenan-specific phosphotransferase enzyme IIA component (EC:2.7.1.-)
Cellobiose PTS, EIIA n=18 Tax=Lactobacillus casei group RepID=B3W9F2_LACCB
Lichenan-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:EPC64301.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
L2_013_014G1_scaffold_38_22
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20966..22066)
DNA (1101bp) protein (367aa)
Outer surface protein n=4 Tax=Lactobacillus casei group RepID=K6RB06_LACCA
PTS-associated protein
Outer surface protein {ECO:0000313|EMBL:GAN36035.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L2_013_014G1_scaffold_38_23
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22177..22587)
DNA (411bp) protein (137aa)
YbhC protein n=20 Tax=Lactobacillus casei group RepID=C5F8F5_LACPA
ybhC; hypothetical protein ybhC
Uncharacterized protein {ECO:0000313|EMBL:EPC87172.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L2_013_014G1_scaffold_38_24
unknown

Not on your lists

comp(22584..22772)
DNA (189bp) protein (63aa)

This feature has no annotations

L2_013_014G1_scaffold_38_25
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22762..24186)
DNA (1425bp) protein (475aa)
PTS system protein n=23 Tax=Lactobacillus casei group RepID=C5F8F7_LACPA
PTS system protein
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
L2_013_014G1_scaffold_38_26
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25050..27272
DNA (2223bp) protein (741aa)
Alpha-galactosidase n=5 Tax=Lactobacillus casei group RepID=K6QNL8_LACCA
Alpha-galactosidase {ECO:0000313|EMBL:GAN36031.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
alpha-galactosidase
L2_013_014G1_scaffold_38_27
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27335..28078
DNA (744bp) protein (248aa)
UPF0246 protein LCALPC37_1696 n=3 Tax=Lactobacillus casei group RepID=K6TBY8_LACCA
UPF0246 protein Lpp74_10072 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=1256199 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp74.;"
hypothetical protein
L2_013_014G1_scaffold_38_28
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28346..29092
DNA (747bp) protein (249aa)
DNA-binding response regulator, CitB family (Rec-wHTH domains) n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp120 RepID=S2MWZ8_LACPA
CitB family DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:GAN36029.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L2_013_014G1_scaffold_38_29
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29438..32020)
DNA (2583bp) protein (861aa)
Exodeoxyribonuclease V alpha chain n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2LM68_LACPA
ATP-dependent exoDNAse {ECO:0000313|EMBL:EPC89636.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
RecD-like DNA helicase
L2_013_014G1_scaffold_38_30
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32061..32651)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei (strain Zhang) RepID=D8GAE7_LACCZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC55020.1}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
Displaying items 1-30 of 84 in total

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