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L2_013_014G1_scaffold_108

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_014G1_scaffold_108_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(635..1171)
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XND5_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80109.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_108_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1362..1973)
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R484_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT24976.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L2_013_014G1_scaffold_108_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1986..2303)
DNA (318bp) protein (106aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CSJ0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18365.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_013_014G1_scaffold_108_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2893..4251
DNA (1359bp) protein (453aa)
Putative purine permease CPE0397 n=4 Tax=Clostridium perfringens RepID=Y397_CLOPE
uapC; transporter
Uracil-xanthine permease {ECO:0000313|EMBL:EDT27889.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_014G1_scaffold_108_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4666..5505)
DNA (840bp) protein (280aa)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Clostridium perfringens F262 RepID=H7CSI5_CLOPF
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:EIA18360.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
nadC; nicotinate-nucleotide pyrophosphorylase
L2_013_014G1_scaffold_108_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5462..6781)
DNA (1320bp) protein (440aa)
L-aspartate oxidase {ECO:0000313|EMBL:EDT72578.1}; EC=1.4.3.16 {ECO:0000313|EMBL:EDT72578.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
nadB; L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V0V3_CLOPF
L2_013_014G1_scaffold_108_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6786..7691)
DNA (906bp) protein (302aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Quinolinate synthase A n=6 Tax=Clostridium perfringens RepID=NADA_CLOPE
nadA; quinolinate synthetase
L2_013_014G1_scaffold_108_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7998..8861)
DNA (864bp) protein (288aa)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EDT27995.1}; EC=1.1.1.60 {ECO:0000313|EMBL:EDT27995.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUE3_CLOPF
hypothetical protein
L2_013_014G1_scaffold_108_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8962..9114)
DNA (153bp) protein (51aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q0SVZ6_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87802.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_014G1_scaffold_108_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9239..10072)
DNA (834bp) protein (278aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNZ4_CLOPF
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDT72585.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
phosphoesterase
L2_013_014G1_scaffold_108_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10541..11503
DNA (963bp) protein (321aa)
Histidine decarboxylase, pyruvoyl type {ECO:0000313|EMBL:EDT25120.1}; EC=4.1.1.22 {ECO:0000313|EMBL:EDT25120.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
histidine decarboxylase, pyruvoyl type (EC:4.1.1.22)
Histidine decarboxylase, pyruvoyl type n=3 Tax=Clostridium perfringens RepID=B1R496_CLOPF
L2_013_014G1_scaffold_108_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11549..12994
DNA (1446bp) protein (482aa)
Putative amino-acid transporter CPF_0377 n=8 Tax=Clostridium perfringens RepID=Y377_CLOP1
arginine/ornithine antiporter
Putative arginine/ornithine antiporter {ECO:0000313|EMBL:EDT25136.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_014G1_scaffold_108_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13422..14612)
DNA (1191bp) protein (397aa)
deoB; phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase {ECO:0000255|HAMAP-Rule:MF_00740}; EC=5.4.2.7 {ECO:0000255|HAMAP-Rule:MF_00740};; Phosphodeoxyribomutase {ECO:0000255|HAMAP-Rule:MF_00740}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
Phosphopentomutase n=7 Tax=Clostridium perfringens RepID=DEOB_CLOP1
L2_013_014G1_scaffold_108_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14667..15452)
DNA (786bp) protein (262aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
udp; uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase n=3 Tax=Clostridium perfringens RepID=B1BGK7_CLOPF
L2_013_014G1_scaffold_108_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15687..16418
DNA (732bp) protein (244aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R4A0_CLOPF
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDT25021.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
transcriptional regulator
L2_013_014G1_scaffold_108_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16441..17259)
DNA (819bp) protein (273aa)
Oxidoreductase, short-chain dehydrogenase/reductase family n=5 Tax=Clostridium perfringens RepID=Q0TU60_CLOP1
short chain dehydrogenase/reductase oxidoreductase
Oxidoreductase, short-chain dehydrogenase/reductase family {ECO:0000313|EMBL:EDT27838.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_014G1_scaffold_108_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17664..18584
DNA (921bp) protein (307aa)
Polysaccharide deacetylase family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R4A2_CLOPF
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EDT25024.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
xylanase/chitin deacetilase
L2_013_014G1_scaffold_108_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18845..19915
DNA (1071bp) protein (357aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R4A3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT25144.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
oxidoreductase
L2_013_014G1_scaffold_108_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19960..20358)
DNA (399bp) protein (133aa)
Uncharacterized 14.9 kDa protein in nagH 3'region n=2 Tax=Clostridium perfringens RepID=YNGD_CLOPF
toxin secretion/phage lysis holin
Uncharacterized 14.9 kDa protein in nagH 3'region; ORFD; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
L2_013_014G1_scaffold_108_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20616..21644)
DNA (1029bp) protein (343aa)
Lysozyme {ECO:0000256|RuleBase:RU361176}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU361176};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Glycosyl hydrolase, family 25 n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R4A5_CLOPF
autolytic lysozyme
L2_013_014G1_scaffold_108_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21910..22308
DNA (399bp) protein (133aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CSF9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18334.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_014G1_scaffold_108_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22392..24173)
DNA (1782bp) protein (594aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGK0_CLOPF
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EDS80968.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
ABC transporter permease/ATP-binding protein
L2_013_014G1_scaffold_108_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24166..25899)
DNA (1734bp) protein (578aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGJ9_CLOPF
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EDS81009.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
ABC transporter permease/ATP-binding protein
L2_013_014G1_scaffold_108_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26292..28085)
DNA (1794bp) protein (598aa)
Myosin-cross-reactive antigen n=6 Tax=Clostridium perfringens RepID=H7CSF6_CLOPF
Myosin-cross-reactive antigen {ECO:0000313|EMBL:EIA18331.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_013_014G1_scaffold_108_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28435..29013)
DNA (579bp) protein (193aa)
Transcriptional regulator, TetR family n=2 Tax=Clostridium perfringens RepID=Q0TU69_CLOP1
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDT24932.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_014G1_scaffold_108_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29132..29683)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CSF4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18329.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_014G1_scaffold_108_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29885..32422)
DNA (2538bp) protein (846aa)
Endo-beta-galactosidase C n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNT4_CLOPF
Endo-beta-galactosidase C {ECO:0000313|EMBL:EDT16660.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
endo-beta-galactosidase C
L2_013_014G1_scaffold_108_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32461..34668)
DNA (2208bp) protein (736aa)
Alpha-galactosidase AgaN n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNT5_CLOPF
Alpha-galactosidase AgaN {ECO:0000313|EMBL:EDT16774.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
aga; alpha-galactosidase
L2_013_014G1_scaffold_108_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34696..35523)
DNA (828bp) protein (276aa)
ABC-type sugar transport system, permease component n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNT6_CLOPF
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EDT16688.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
suger ABC transporter
L2_013_014G1_scaffold_108_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35540..36466)
DNA (927bp) protein (309aa)
ABC-type sugar transport system, permease component n=3 Tax=Clostridium perfringens RepID=B1R4B4_CLOPF
ABC transporter
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EDT25127.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Displaying items 1-30 of 33 in total

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