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L2_013_014G1_scaffold_134

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_014G1_scaffold_134_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1910..2791)
DNA (882bp) protein (294aa)
LD-carboxypeptidase family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMJ4_CLOP1
LD-carboxypeptidase
LD-carboxypeptidase family protein {ECO:0000313|EMBL:EDT25988.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_014G1_scaffold_134_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2883..3827)
DNA (945bp) protein (315aa)
Probable transport protein n=9 Tax=Clostridium perfringens RepID=Q8XHM6_CLOPE
cation transporter
Putative cation transporter {ECO:0000313|EMBL:EIA15970.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_014G1_scaffold_134_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4102..4599
DNA (498bp) protein (166aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZG1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14450.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_014G1_scaffold_134_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4629..5798)
DNA (1170bp) protein (390aa)
Amidohydrolase homolog n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMJ7_CLOP1
amidohydrolase
Uncharacterized protein {ECO:0000313|EMBL:BAB82161.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_134_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5954..6130
DNA (177bp) protein (59aa)
Probable sigma-F transcribed protein n=10 Tax=Clostridium perfringens RepID=Q8XHM9_CLOPE
putative csfB protein
Putative csfB protein {ECO:0000313|EMBL:EDT26017.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_014G1_scaffold_134_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6148..7578
DNA (1431bp) protein (477aa)
Orn/Lys/Arg decarboxylase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSR9_CLOPF
Orn/Lys/Arg decarboxylase {ECO:0000313|EMBL:EDT14424.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Orn/Lys/Arg decarboxylase
L2_013_014G1_scaffold_134_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7825..8415
DNA (591bp) protein (197aa)
Guanylate kinase-like protein n=7 Tax=Clostridium perfringens RepID=H7CZF7_CLOPF
gmk; guanylate kinase
Guanylate kinase-like protein {ECO:0000313|EMBL:EIA15965.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_014G1_scaffold_134_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8432..8587
DNA (156bp) protein (52aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CZF6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26018.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_014G1_scaffold_134_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8743..9072
DNA (330bp) protein (110aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CZF5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82156.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_134_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9094..10017
DNA (924bp) protein (308aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III delta' subunit n=5 Tax=Clostridium perfringens RepID=Q8XHN4_CLOPE
DNA polymerase III delta' subunit {ECO:0000313|EMBL:BAB82155.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_134_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10020..10925
DNA (906bp) protein (302aa)
PSP1 domain-containing protein n=10 Tax=Clostridium perfringens RepID=H7CZF3_CLOPF
PSP1 domain-containing protein
Signal peptidase-like protein {ECO:0000313|EMBL:BAB82154.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_134_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11094..11264
DNA (171bp) protein (57aa)
Ferredoxin n=11 Tax=Clostridium perfringens RepID=FER_CLOPE
ferredoxin (fdxA)
Putative ferredoxin {ECO:0000313|EMBL:ABG86239.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_014G1_scaffold_134_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11382..13064
DNA (1683bp) protein (561aa)
Mur ligase family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJ67_CLOPF
Mur ligase
Mur ligase family protein {ECO:0000313|EMBL:EDT26000.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_014G1_scaffold_134_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13114..13767)
DNA (654bp) protein (218aa)
Putative zinc-dependent hydrolase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BK38_CLOPF
Putative zinc-dependent hydrolase {ECO:0000313|EMBL:EDS79854.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_013_014G1_scaffold_134_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13984..14439
DNA (456bp) protein (152aa)
Transcriptional regulator CtsR n=10 Tax=Clostridium perfringens RepID=H7CZE9_CLOPF
transcriptional repressor
Transcriptional regulator CtsR {ECO:0000313|EMBL:EIA15957.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_014G1_scaffold_134_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14459..14986
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVC0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA15956.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_013_014G1_scaffold_134_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14970..15983
DNA (1014bp) protein (338aa)
Protein-arginine kinase {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166216}; EC=2.7.14.1 {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166206};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Putative ATP:guanido phosphotransferase HMPREF9476_02490 n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVB9_CLOPF
ATP:guanido phosphotransferase
L2_013_014G1_scaffold_134_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16008..18458
DNA (2451bp) protein (817aa)
Negative regulator of genetic competence MecB/ClpC {ECO:0000313|EMBL:EDT26011.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDT26011.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Negative regulator of genetic competence MecB/ClpC n=3 Tax=Clostridium perfringens RepID=B1RJ62_CLOPF
clpC; negative regulator of genetic competence MecB/ClpC
L2_013_014G1_scaffold_134_19
unknown

Not on your lists

18536..18883
DNA (348bp) protein (116aa)

This feature has no annotations

L2_013_014G1_scaffold_134_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19102..20040
DNA (939bp) protein (313aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Thioredoxin reductase n=10 Tax=Clostridium perfringens RepID=H7CZE5_CLOPF
thioredoxin-disulfide reductase
L2_013_014G1_scaffold_134_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20043..20276
DNA (234bp) protein (78aa)
YruB family glutaredoxin-like protein n=11 Tax=Clostridium perfringens RepID=H7CZE4_CLOPF
YruB family glutaredoxin-like protein
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:EDT22973.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_014G1_scaffold_134_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20293..21741
DNA (1449bp) protein (483aa)
NADP-dependent glyceraldehyde-3-phosphate dehydrogenas n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHP4_CLOPE
gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenas
NADP-dependent glyceraldehyde-3-phosphate dehydrogenas {ECO:0000313|EMBL:BAB82144.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_134_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21864..22091)
DNA (228bp) protein (76aa)
Glutaredoxin-like protein, YruB-family n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQB2_CLOPS
glutaredoxin
YruB family glutaredoxin-like protein {ECO:0000313|EMBL:EIA15950.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_014G1_scaffold_134_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22550..23278
DNA (729bp) protein (243aa)
GntR family transcriptional regulator n=4 Tax=Clostridium perfringens RepID=H7CZE0_CLOPF
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDT25996.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_014G1_scaffold_134_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23269..23997
DNA (729bp) protein (243aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSQ0_CLOPF
L2_013_014G1_scaffold_134_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24224..25609
DNA (1386bp) protein (462aa)
DNA repair protein radA n=3 Tax=Clostridium perfringens RepID=B1BV32_CLOPF
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
radA; DNA repair protein RadA
L2_013_014G1_scaffold_134_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25629..26693
DNA (1065bp) protein (355aa)
DNA integrity scanning protein DisA n=9 Tax=Clostridium perfringens RepID=DISA_CLOPE
DNA integrity scanning protein DisA
DNA integrity scanning protein DisA {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00010389}; Cyclic di-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01438}; Diadenylate cyclase {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00207481}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_013_014G1_scaffold_134_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26727..27128)
DNA (402bp) protein (134aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XHQ1_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82137.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_134_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27395..28546
DNA (1152bp) protein (384aa)
PIN/TRAM domain protein n=2 Tax=Clostridium perfringens RepID=B1BK22_CLOPF
PIN/TRAM domain-containing protein
PIN/TRAM domain protein {ECO:0000313|EMBL:EDT14415.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_014G1_scaffold_134_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28560..29237
DNA (678bp) protein (226aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=8 Tax=Clostridium perfringens RepID=ISPD_CLOP1
Displaying items 1-30 of 32 in total

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