ggKbase home page

L2_013_014G1_scaffold_139

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_014G1_scaffold_139_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

911..1075
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R996_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT23177.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_014G1_scaffold_139_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1239..1382
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R995_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT23188.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_014G1_scaffold_139_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1682..1846
DNA (165bp) protein (55aa)
DNA polymerase III subunit alpha {ECO:0000313|EMBL:EDS78800.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EDS78800.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
DNA polymerase III subunit alpha n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BNA9_CLOPF
transposase
L2_013_014G1_scaffold_139_4
unknown

Not on your lists

2086..2298
DNA (213bp) protein (71aa)

This feature has no annotations

L2_013_014G1_scaffold_139_5
unknown

Not on your lists

2380..2529
DNA (150bp) protein (50aa)

This feature has no annotations

L2_013_014G1_scaffold_139_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2773..2976
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BVP4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14271.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_014G1_scaffold_139_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3111..3299
DNA (189bp) protein (63aa)
CHC2 zinc finger domain protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BVP5_CLOPF
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EDT14254.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_014G1_scaffold_139_8
unknown

Not on your lists

4490..4600
DNA (111bp) protein (37aa)

This feature has no annotations

L2_013_014G1_scaffold_139_9
unknown

Not on your lists

5340..5429
DNA (90bp) protein (30aa)

This feature has no annotations

L2_013_014G1_scaffold_139_10
unknown

Not on your lists

comp(6721..7113)
DNA (393bp) protein (131aa)

This feature has no annotations

L2_013_014G1_scaffold_139_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7520..7669
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q93MC3_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB62462.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_139_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7891..8013
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q93MC2_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB62463.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_139_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8159..9217
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q93MC1_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB62464.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_139_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9297..9494
DNA (198bp) protein (66aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7D099_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD90634.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
L2_013_014G1_scaffold_139_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9544..9960
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q93MB9_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB62466.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_139_16
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10002..11825
DNA (1824bp) protein (608aa)
hypothetical protein n=1 Tax=Bacillus cereus RepID=UPI0002B8E466
Uncharacterized protein {ECO:0000313|EMBL:EOP60933.1}; TaxID=1053249 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VDM053.;"
hypothetical protein
L2_013_014G1_scaffold_139_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12626..12745
DNA (120bp) protein (40aa)
Rep1 n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BYI6_CLOPF
Rep1 {ECO:0000313|EMBL:EDT13239.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_014G1_scaffold_139_18
unknown

Not on your lists

comp(12784..12933)
DNA (150bp) protein (50aa)

This feature has no annotations

L2_013_014G1_scaffold_139_19
unknown

Not on your lists

comp(13164..13487)
DNA (324bp) protein (108aa)

This feature has no annotations

L2_013_014G1_scaffold_139_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16589..16777)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B241_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25567.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_013_014G1_scaffold_139_21
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16846..17607)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RXN0_9FIRM
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR01950.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
RNA-directed DNA polymerase
L2_013_014G1_scaffold_139_22
Listeria ivanovii, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18210..19823
DNA (1614bp) protein (538aa)
Phosphatidylinositol-specific phospholipase c (Fragment) n=1 Tax=Mycoplasma anatis 1340 RepID=F9QDG0_9MOLU
1-phosphatidylinositol phosphodiesterase
PlcA {ECO:0000313|EMBL:AAR97342.1}; TaxID=202751 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria ivanovii subsp. ivanovii.;"
L2_013_014G1_scaffold_139_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20151..21044
DNA (894bp) protein (298aa)
Transposase for insertion sequence element n=2 Tax=Clostridium perfringens RepID=B1R9G6_CLOPF
Transposase for insertion sequence element {ECO:0000313|EMBL:EDT23089.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
transposase for insertion sequence element D
L2_013_014G1_scaffold_139_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21099..21572
DNA (474bp) protein (158aa)
Transposase for insertion sequence element n=2 Tax=Clostridium perfringens RepID=B1R9G6_CLOPF
Transposase for insertion sequence element {ECO:0000313|EMBL:EDT23089.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
IS231B transposase
L2_013_014G1_scaffold_139_25
Planococcus sp. PAMC 21323, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21925..22611
DNA (687bp) protein (229aa)
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235, ECO:0000256|SAAS:SAAS00074327};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=1526927 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus.;" source="Planococcus sp. PAMC 21323.;"
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Planococcus donghaensis MPA1U2 RepID=E7RCR3_9BACL
L2_013_014G1_scaffold_139_26
GWC2_OP9X_49_35_curated, OP9X, Bacteria

Not on your lists

22623..23930
DNA (1308bp) protein (436aa)
H+/gluconate symporter family protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IKI9_THETR
H+/gluconate symporter family protein
Tax=GWC2_OP9X_49_35_curated
L2_013_014G1_scaffold_139_27
GWC2_OP9X_49_35_curated, OP9X, Bacteria

Not on your lists

24006..26153
DNA (2148bp) protein (716aa)
Hydantoinase/oxoprolinase n=1 Tax=Clostridium intestinale URNW RepID=U2PVZ9_9CLOT
hydantoinase/oxoprolinase
Tax=GWC2_OP9X_49_35_curated
L2_013_014G1_scaffold_139_28
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26176..26856
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NPX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK30911.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
L2_013_014G1_scaffold_139_29
GWC2_OP9X_49_35_curated, OP9X, Bacteria

Not on your lists

26861..28213
DNA (1353bp) protein (451aa)
Putative oxidoreductase n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GVY5_SELRL
putative oxidoreductase
Tax=GWC2_OP9X_49_35_curated
L2_013_014G1_scaffold_139_30
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28425..29303
DNA (879bp) protein (293aa)
Putative SIS domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EP46_9CLOT
Putative SIS domain protein {ECO:0000313|EMBL:CDG01045.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
RpiR family transcriptional regulator
Displaying items 1-30 of 32 in total

View Taxonomy