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L2_013_014G1_scaffold_153

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_014G1_scaffold_153_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..377
DNA (375bp) protein (125aa)
cysE; serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Serine acetyltransferase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V854_CLOPF
L2_013_014G1_scaffold_153_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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523..1515
DNA (993bp) protein (331aa)
Putative iron-sulfur cluster-binding protein n=2 Tax=Clostridium perfringens RepID=H7CW00_CLOPF
Putative iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EIA17225.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
iron-sulfur cluster-binding protein
L2_013_014G1_scaffold_153_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1553..2257
DNA (705bp) protein (235aa)
sn-glycerol-3-phosphate acyltransferase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BX74_CLOPF
sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:EDT13683.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
plsD; sn-glycerol-3-phosphate acyltransferase
L2_013_014G1_scaffold_153_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2269..2898
DNA (630bp) protein (210aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Endonuclease III n=7 Tax=Clostridium perfringens RepID=H7CVZ8_CLOPF
endonuclease III
L2_013_014G1_scaffold_153_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2927..3790)
DNA (864bp) protein (288aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CVZ7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17222.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_013_014G1_scaffold_153_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3890..6355
DNA (2466bp) protein (822aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Sensory box histidine kinase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RTE0_CLOPF
two-component sensor histidine kinase
L2_013_014G1_scaffold_153_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6475..7380
DNA (906bp) protein (302aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RTE1_CLOPF
L2_013_014G1_scaffold_153_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7454..8419
DNA (966bp) protein (322aa)
Glucosyl hydrolase family protein n=2 Tax=Clostridium perfringens RepID=H7CVZ4_CLOPF
glycosyl hydrolase
Glucosyl hydrolase family protein {ECO:0000313|EMBL:EIA17219.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_014G1_scaffold_153_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8581..10170
DNA (1590bp) protein (530aa)
VanW-like family protein n=6 Tax=Clostridium perfringens RepID=H7CVZ3_CLOPF
VanW-like family protein {ECO:0000313|EMBL:EDT25634.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
von Willebrand factor A
L2_013_014G1_scaffold_153_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10312..11145
DNA (834bp) protein (278aa)
HAD family hydrolase n=1 Tax=Clostridium perfringens F262 RepID=H7CVZ2_CLOPF
HAD family hydrolase {ECO:0000313|EMBL:EIA17217.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
HAD family hydrolase
L2_013_014G1_scaffold_153_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11234..11695
DNA (462bp) protein (154aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=7 Tax=Clostridium perfringens RepID=H7CVZ1_CLOPF
RNA methyltransferase
L2_013_014G1_scaffold_153_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11710..12549
DNA (840bp) protein (280aa)
DegV family protein n=2 Tax=Clostridium perfringens RepID=Q0TQY0_CLOP1
degV family protein
DegV family protein {ECO:0000313|EMBL:EDT25651.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_014G1_scaffold_153_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12640..13710
DNA (1071bp) protein (357aa)
Lipoprotein, BMP family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BX84_CLOPF
Lipoprotein, BMP family {ECO:0000313|EMBL:EDT13703.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Bmp family lipoprotein
L2_013_014G1_scaffold_153_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14313..14822
DNA (510bp) protein (170aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XKT5_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81014.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_153_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14809..15576
DNA (768bp) protein (256aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XKT6_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81013.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_153_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15828..17213
DNA (1386bp) protein (462aa)
sigL; RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase sigma factor sigma54 n=3 Tax=Clostridium perfringens RepID=Q8XKT7_CLOPE
RNA polymerase sigma factor sigma54 {ECO:0000313|EMBL:BAB81012.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_153_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17367..18473
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQY6_CLOPF
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB81011.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_153_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18564..19562
DNA (999bp) protein (333aa)
gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=10 Tax=Clostridium perfringens RepID=H7CVY4_CLOPF
L2_013_014G1_scaffold_153_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19706..20899
DNA (1194bp) protein (398aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000255|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000255|HAMAP-Rule:MF_00145};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Phosphoglycerate kinase n=2 Tax=Clostridium perfringens RepID=PGK_CLOPS
L2_013_014G1_scaffold_153_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21143..21889
DNA (747bp) protein (249aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000255|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000255|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00147}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Triosephosphate isomerase n=16 Tax=Clostridium RepID=TPIS_CLOP1
L2_013_014G1_scaffold_153_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22014..23552
DNA (1539bp) protein (513aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
gpmI; phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=3 Tax=Clostridium perfringens RepID=B1RBC6_CLOPF
L2_013_014G1_scaffold_153_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24124..25581
DNA (1458bp) protein (486aa)
Amino acid antiporter n=5 Tax=Clostridium perfringens RepID=H7CVY0_CLOPF
Glutamate:gamma-aminobutyrate antiporter family protein {ECO:0000313|EMBL:EDT13694.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
glutamate:gamma-aminobutyrate antiporter family protein
L2_013_014G1_scaffold_153_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25789..25929
DNA (141bp) protein (47aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CVX9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13690.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_014G1_scaffold_153_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26297..27592
DNA (1296bp) protein (432aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Enolase n=8 Tax=Clostridium perfringens RepID=ENO_CLOP1
Displaying 24 items

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