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L2_013_014G1_scaffold_162

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_014G1_scaffold_162_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..300)
DNA (300bp) protein (100aa)
Rubredoxin/rubrerythrin n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SV42_CLOPS
rubredoxin/rubrerythrin
Rubredoxin/rubrerythrin {ECO:0000313|EMBL:EDT24146.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_014G1_scaffold_162_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(833..1168)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R6K2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT24125.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L2_013_014G1_scaffold_162_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2045..3295)
DNA (1251bp) protein (417aa)
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Phosphoribosylamine--glycine ligase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SV47_CLOPS
L2_013_014G1_scaffold_162_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3403..4908)
DNA (1506bp) protein (502aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGV1_CLOPF
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_014G1_scaffold_162_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4921..5535)
DNA (615bp) protein (205aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=3 Tax=Clostridium perfringens RepID=H7CTD5_CLOPF
L2_013_014G1_scaffold_162_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5523..6524)
DNA (1002bp) protein (334aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BL54_CLOPF
L2_013_014G1_scaffold_162_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6525..7970)
DNA (1446bp) protein (482aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Amidophosphoribosyltransferase n=2 Tax=Clostridium perfringens RepID=Q8XMK5_CLOPE
L2_013_014G1_scaffold_162_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8289..8996)
DNA (708bp) protein (236aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=3 Tax=Clostridium perfringens RepID=H7CTD2_CLOPF
L2_013_014G1_scaffold_162_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8996..9475)
DNA (480bp) protein (160aa)
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGU6_CLOPF
L2_013_014G1_scaffold_162_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9787..13587)
DNA (3801bp) protein (1267aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:EDT73053.1}; EC=6.3.5.3 {ECO:0000313|EMBL:EDT73053.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQR0_CLOPF
L2_013_014G1_scaffold_162_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13826..15136)
DNA (1311bp) protein (437aa)
Phosphomethylpyrimidine synthase {ECO:0000255|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000255|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089}; Short=HMP-P synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMP-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMPP synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Thiamine biosynthesis protein ThiC {ECO:0000255|HAMAP-Rule:MF_00089}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Phosphomethylpyrimidine synthase n=3 Tax=Clostridium perfringens RepID=THIC_CLOP1
thiC; thiamine biosynthesis protein ThiC
L2_013_014G1_scaffold_162_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15642..16292)
DNA (651bp) protein (217aa)
dut; deoxyuridine 5-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5-triphosphate nucleotidohydrolase {ECO:0000313|EMBL:EDT24148.1}; EC=3.6.1.23 {ECO:0000313|EMBL:EDT24148.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Deoxyuridine 5-triphosphate nucleotidohydrolase n=2 Tax=Clostridium perfringens RepID=Q0TTB8_CLOP1
L2_013_014G1_scaffold_162_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16538..16843)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQR3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG85891.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_014G1_scaffold_162_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17033..17767)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNI0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17928.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_013_014G1_scaffold_162_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17868..18035)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQR5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79552.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_013_014G1_scaffold_162_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18037..19122)
DNA (1086bp) protein (362aa)
HRDC domain protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BL64_CLOPF
HRDC domain protein {ECO:0000313|EMBL:EDS79562.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
HRDC domain-containing protein
L2_013_014G1_scaffold_162_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19278..20264)
DNA (987bp) protein (329aa)
birA; bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor (EC:6.3.4.15)
BirA bifunctional protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZE6_CLOPF
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_013_014G1_scaffold_162_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20469..20831)
DNA (363bp) protein (121aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CTC2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17924.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_014G1_scaffold_162_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21134..21700
DNA (567bp) protein (189aa)
NUDIX family hydrolase n=4 Tax=Clostridium perfringens RepID=H7CTC1_CLOPF
NUDIX family hydrolase
NUDIX family hydrolase {ECO:0000313|EMBL:EIA17923.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_014G1_scaffold_162_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21770..23026)
DNA (1257bp) protein (419aa)
Voltage-gated chloride channel family protein n=3 Tax=Clostridium perfringens RepID=H7CTC0_CLOPF
Voltage-gated chloride channel family protein {ECO:0000313|EMBL:EIA17922.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
voltage-gated chloride channel family protein
L2_013_014G1_scaffold_162_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23068..23454)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CTB9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17921.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_013_014G1_scaffold_162_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23619..23762)
DNA (144bp) protein (48aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CTB7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26831.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_014G1_scaffold_162_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24202..26157
DNA (1956bp) protein (652aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNH1_CLOPF
Displaying 23 items

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