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L2_013_014G1_scaffold_164

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_014G1_scaffold_164_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..227
DNA (225bp) protein (75aa)
Probable spore coat protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIA3_CLOPE
cotS; spore coat protein CotS
Spore coat protein CotS {ECO:0000313|EMBL:EDS79754.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_013_014G1_scaffold_164_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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420..1307
DNA (888bp) protein (296aa)
Peptidase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRR1_CLOPF
Peptidase family protein {ECO:0000313|EMBL:EDT15637.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
peptidase
L2_013_014G1_scaffold_164_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1470..1706
DNA (237bp) protein (79aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CYP0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15572.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_014G1_scaffold_164_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2066..3628
DNA (1563bp) protein (521aa)
LysM domain protein n=4 Tax=Clostridium perfringens RepID=Q0TN97_CLOP1
lysM domain-containing protein
LysM domain protein {ECO:0000313|EMBL:EDT27045.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_014G1_scaffold_164_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3690..4556
DNA (867bp) protein (289aa)
cphB; cyanophycinase (EC:3.-.-.-)
Cyanophycinase {ECO:0000313|EMBL:EDT23934.1}; EC=3.-.-.- {ECO:0000313|EMBL:EDT23934.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Cyanophycinase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TN98_CLOP1
L2_013_014G1_scaffold_164_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4543..7167
DNA (2625bp) protein (875aa)
Cyanophycin synthetase {ECO:0000313|EMBL:EDT23935.1}; EC=6.-.-.- {ECO:0000313|EMBL:EDT23935.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
cphA; cyanophycin synthetase (EC:6.-.-.-)
Cyanophycin synthetase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R743_CLOPF
L2_013_014G1_scaffold_164_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7303..8169
DNA (867bp) protein (289aa)
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=6 Tax=Clostridium perfringens RepID=ISPE_CLOP1
L2_013_014G1_scaffold_164_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8238..8867
DNA (630bp) protein (210aa)
Stage II sporulation protein R n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V5E4_CLOPF
Stage II sporulation protein R {ECO:0000313|EMBL:EDT70969.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
spoIIR; stage II sporulation protein R
L2_013_014G1_scaffold_164_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8913..9893
DNA (981bp) protein (327aa)
Thiamin biosynthesis protein ThiI n=3 Tax=Clostridium perfringens RepID=B1BK85_CLOPF
Thiamin biosynthesis protein ThiI {ECO:0000313|EMBL:EDT27032.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
thiamin biosynthesis protein ThiI
L2_013_014G1_scaffold_164_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9916..10335
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V5E6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT70978.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_013_014G1_scaffold_164_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10676..12283
DNA (1608bp) protein (536aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=8 Tax=Clostridium perfringens RepID=PYRG_CLOP1
L2_013_014G1_scaffold_164_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12546..14006
DNA (1461bp) protein (487aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Transcription termination factor Rho n=8 Tax=Clostridium perfringens RepID=H7CYN1_CLOPF
rho; transcription termination factor Rho
L2_013_014G1_scaffold_164_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14049..15176)
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTI8_CLOPF
Putative monogalactosyldiacylglycerol synthase {ECO:0000313|EMBL:EDT27012.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
monogalactosyldiacylglycerol synthase
L2_013_014G1_scaffold_164_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15282..15488)
DNA (207bp) protein (69aa)
50S ribosomal protein L31 n=10 Tax=Clostridium perfringens RepID=RL31_CLOP1
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_014G1_scaffold_164_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15644..16243
DNA (600bp) protein (200aa)
tdk; thymidine kinase (EC:2.7.1.21)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Thymidine kinase n=8 Tax=Clostridium perfringens RepID=H7CYM8_CLOPF
L2_013_014G1_scaffold_164_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16269..18032
DNA (1764bp) protein (588aa)
Protein-(Glutamine-N5) methyltransferase, release factor-specific n=2 Tax=Clostridium perfringens RepID=Q0TNA9_CLOP1
Methyltransferase, HemK family {ECO:0000313|EMBL:EDT23998.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
HemK family methyltransferase
L2_013_014G1_scaffold_164_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18089..19171
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=11 Tax=Clostridium perfringens RepID=RF1_CLOP1
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_014G1_scaffold_164_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19250..19840
DNA (591bp) protein (197aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q8XIC0_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15590.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_014G1_scaffold_164_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19863..20915
DNA (1053bp) protein (351aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Clostridium perfringens RepID=Q0TNB2_CLOP1
Sua5/YciO/YrdC/YwlC family protein
L2_013_014G1_scaffold_164_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21180..21629
DNA (450bp) protein (150aa)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:EDT26948.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EDT26948.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Ribose-5-phosphate isomerase B n=8 Tax=Clostridium perfringens RepID=H7CYM2_CLOPF
L2_013_014G1_scaffold_164_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21674..22303
DNA (630bp) protein (210aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01218}; EC=2.4.2.9 {ECO:0000255|HAMAP-Rule:MF_01218};; UMP pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000255|HAMAP-Rule:MF_01218}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
Uracil phosphoribosyltransferase n=10 Tax=Clostridium perfringens RepID=UPP_CLOP1
L2_013_014G1_scaffold_164_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22366..23520
DNA (1155bp) protein (385aa)
mnaA; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ABG85817.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ABG85817.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
UDP-N-acetylglucosamine 2-epimerase n=8 Tax=Clostridium perfringens RepID=H7CYM0_CLOPF
L2_013_014G1_scaffold_164_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23788..24966
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=2 Tax=Clostridium perfringens RepID=B1RLY1_CLOPF
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EDT73234.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Displaying 23 items

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