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L2_013_014G1_scaffold_180

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_014G1_scaffold_180_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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367..1539
DNA (1173bp) protein (391aa)
Putative ROK family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BTH3_CLOPF
Putative ROK family protein {ECO:0000313|EMBL:EDT15047.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
xylR1; xylose repressor
L2_013_014G1_scaffold_180_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1651..2643)
DNA (993bp) protein (331aa)
3'-5' exoribonuclease YhaM {ECO:0000313|EMBL:EDT71806.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDT71806.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
3'-5' exoribonuclease YhaM n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2U9_CLOPF
CMP-binding factor
L2_013_014G1_scaffold_180_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2753..4027
DNA (1275bp) protein (425aa)
PolyA polymerase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BTH5_CLOPF
PolyA polymerase family protein {ECO:0000313|EMBL:EDT15012.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
poly(A) polymerase
L2_013_014G1_scaffold_180_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4066..7881)
DNA (3816bp) protein (1272aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BTH6_CLOPF
addA; ATP-dependent deoxyribonuclease subunit A
L2_013_014G1_scaffold_180_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7871..11347)
DNA (3477bp) protein (1159aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044573}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044602};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044578};; ATP-dependent helicase/nuclease AddB {ECO:0000256|HAMAP-Rule:MF_01452}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHY4_CLOPF
addB; ATP-dependent nuclease subunit B
L2_013_014G1_scaffold_180_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11556..11720
DNA (165bp) protein (55aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CRG7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26666.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_014G1_scaffold_180_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11809..12690)
DNA (882bp) protein (294aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CRG6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79724.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_180_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12939..13121
DNA (183bp) protein (61aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CRG5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23624.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_014G1_scaffold_180_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13451..13717)
DNA (267bp) protein (89aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CRG4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18695.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_014G1_scaffold_180_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14325..14744)
DNA (420bp) protein (140aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q8XPE8_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23572.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_014G1_scaffold_180_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14921..16276)
DNA (1356bp) protein (452aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Serine--tRNA ligase n=9 Tax=Clostridium perfringens RepID=SYS_CLOPE
L2_013_014G1_scaffold_180_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16550..16783)
DNA (234bp) protein (78aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CRG1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26687.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_014G1_scaffold_180_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16796..18190)
DNA (1395bp) protein (465aa)
FAD-dependent oxidoreductase n=2 Tax=Clostridium perfringens RepID=Q0TV55_CLOP1
FAD-dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:EDT23602.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_014G1_scaffold_180_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18441..21197)
DNA (2757bp) protein (919aa)
UPF0182 protein AC7_0007 n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RS66_CLOPF
UPF0182 protein CPC_0005 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_013_014G1_scaffold_180_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21758..22261)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2T7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT71831.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
Displaying 15 items

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