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L2_013_014G1_scaffold_235

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_014G1_scaffold_235_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1118
DNA (1116bp) protein (372aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Sensory box histidine kinase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2S6_CLOPF
two-component sensor histidine kinase
L2_013_014G1_scaffold_235_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1149..1883)
DNA (735bp) protein (245aa)
PP-loop family protein n=6 Tax=Clostridium perfringens RepID=Q0SU26_CLOPS
exoenzyme S synthesis protein B
ExsB family protein {ECO:0000313|EMBL:EDT13328.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_014G1_scaffold_235_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2084..2830
DNA (747bp) protein (249aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
tRNA pseudouridine synthase A n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRP6_CLOP1
L2_013_014G1_scaffold_235_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2897..3964)
DNA (1068bp) protein (356aa)
Oxidoreductase, 2-nitropropane dioxygenase family protein n=1 Tax=Clostridium perfringens F262 RepID=H7CV54_CLOPF
oxidoreductase, 2-nitropropane dioxygenase
Oxidoreductase, 2-nitropropane dioxygenase family protein {ECO:0000313|EMBL:EIA17408.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_014G1_scaffold_235_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4165..4875
DNA (711bp) protein (237aa)
Crp/FNR family transcriptional regulator n=8 Tax=Clostridium perfringens RepID=H7CV55_CLOPF
Crp/FNR family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EDT13332.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_014G1_scaffold_235_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4932..5843)
DNA (912bp) protein (304aa)
Radical SAM domain-containing protein n=2 Tax=Clostridium perfringens RepID=H7CV56_CLOPF
radical SAM domain-containing protein
Radical SAM domain-containing protein {ECO:0000313|EMBL:EIA17410.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_014G1_scaffold_235_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5986..7020
DNA (1035bp) protein (345aa)
Aminopeptidase, M42 family n=2 Tax=Clostridium perfringens RepID=B1BYA0_CLOPF
Aminopeptidase, M42 family {ECO:0000313|EMBL:EDT13327.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
aminopeptidase
L2_013_014G1_scaffold_235_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7340..8011
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RN51_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26718.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_014G1_scaffold_235_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8027..9703
DNA (1677bp) protein (559aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQ67_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT22430.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_014G1_scaffold_235_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10361..12019
DNA (1659bp) protein (553aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BEH7_CLOPF
L2_013_014G1_scaffold_235_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12195..12350
DNA (156bp) protein (52aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CV61_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80705.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_014G1_scaffold_235_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12453..13067
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RRN1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23361.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_014G1_scaffold_235_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13161..14783)
DNA (1623bp) protein (541aa)
aspartate aminotransferase (EC:2.6.1.1)
L-aspartate beta-decarboxylase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V6G3_CLOPF
L-aspartate beta-decarboxylase {ECO:0000313|EMBL:EDT70581.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_013_014G1_scaffold_235_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14894..15340)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CV64_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17418.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
Displaying 14 items

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