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L2_013_015G1_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 568 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_015G1_scaffold_0_1
unknown

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2..148
DNA (147bp) protein (49aa)

This feature has no annotations

L2_013_015G1_scaffold_0_2
unknown

Not on your lists

363..518
DNA (156bp) protein (52aa)

This feature has no annotations

L2_013_015G1_scaffold_0_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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494..856
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQY8_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87000.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_015G1_scaffold_0_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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915..1589
DNA (675bp) protein (225aa)
atpB; F0F1 ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQY9_CLOPS
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_015G1_scaffold_0_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1650..1868
DNA (219bp) protein (73aa)
atpE; F0F1 ATP synthase subunit C (EC:3.6.3.14)
ATP synthase subunit c n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=ATPL_CLOPS
ATP synthase subunit c {ECO:0000255|HAMAP-Rule:MF_01396}; ATP synthase F(0) sector subunit c {ECO:0000255|HAMAP-Rule:MF_01396}; F-type ATPase subunit c {ECO:0000255|HAMAP-Rule:MF_01396}; Short=F-ATPase subunit c {ECO:0000255|HAMAP-Rule:MF_01396};; Lipid-binding protein {ECO:0000255|HAMAP-Rule:MF_01396}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_015G1_scaffold_0_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1968..2447
DNA (480bp) protein (160aa)
ATP synthase subunit b n=2 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=ATPF_CLOPS
atpF; ATP synthase F0F1 subunit B
ATP synthase subunit b {ECO:0000255|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000255|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000255|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000255|HAMAP-Rule:MF_01398}; Short=F-ATPase subunit b {ECO:0000255|HAMAP-Rule:MF_01398};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_015G1_scaffold_0_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2450..2989
DNA (540bp) protein (180aa)
atpH; ATP synthase F0F1 subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=7 Tax=Clostridium perfringens RepID=ATPD_CLOP1
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_013_015G1_scaffold_0_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3000..4508
DNA (1509bp) protein (503aa)
atpA; F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000255|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000255|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000255|HAMAP-Rule:MF_01346}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
ATP synthase subunit alpha n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=ATPA_CLOPS
L2_013_015G1_scaffold_0_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4573..5424
DNA (852bp) protein (284aa)
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=11 Tax=Clostridium perfringens RepID=ATPG_CLOP1
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_013_015G1_scaffold_0_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5438..6835
DNA (1398bp) protein (466aa)
atpD; ATP synthase F0F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
ATP synthase subunit beta n=10 Tax=Clostridium perfringens RepID=ATPB_CLOP1
L2_013_015G1_scaffold_0_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6851..7252
DNA (402bp) protein (134aa)
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=9 Tax=Clostridium perfringens RepID=ATPE_CLOP1
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_015G1_scaffold_0_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7434..8078
DNA (645bp) protein (215aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XID6_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81891.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_015G1_scaffold_0_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8101..9366
DNA (1266bp) protein (422aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTG7_CLOPF
L2_013_015G1_scaffold_0_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9478..10497
DNA (1020bp) protein (340aa)
Stage II sporulation protein D n=2 Tax=Clostridium perfringens RepID=B1RGF0_CLOPF
spoIID; stage II sporulation protein D
Stage II sporulation protein D {ECO:0000313|EMBL:EDT23937.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_015G1_scaffold_0_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10607..11377
DNA (771bp) protein (257aa)
Putative peptidase n=2 Tax=Clostridium perfringens RepID=B1BKB2_CLOPF
Putative peptidase {ECO:0000313|EMBL:EDS79763.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
peptidase
L2_013_015G1_scaffold_0_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11453..11734
DNA (282bp) protein (94aa)
Stage III sporulation protein D n=11 Tax=Clostridium perfringens RepID=H7CYK5_CLOPF
spoIIID; stage III sporulation protein D
Stage III sporulation protein D {ECO:0000313|EMBL:EDT15573.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_015G1_scaffold_0_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11795..12832
DNA (1038bp) protein (346aa)
Rod shape-determining protein Mbl n=9 Tax=Clostridium perfringens RepID=H7CYK4_CLOPF
mbl; rod shape-determining protein Mbl
Mbl protein {ECO:0000313|EMBL:EDT15625.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_015G1_scaffold_0_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12871..13401)
DNA (531bp) protein (177aa)
Putative sporulation protein YyaC n=2 Tax=Clostridium perfringens RepID=B1BKB5_CLOPF
Putative sporulation protein YyaC {ECO:0000313|EMBL:EDS79711.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
yyaC; putative sporulation protein YyaC
L2_013_015G1_scaffold_0_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13501..14208
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R710_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23932.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_015G1_scaffold_0_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15372..16547
DNA (1176bp) protein (392aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
S-adenosylmethionine synthase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTG0_CLOPF
L2_013_015G1_scaffold_0_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16684..17820)
DNA (1137bp) protein (379aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLW4_CLOPF
L2_013_015G1_scaffold_0_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17957..20191
DNA (2235bp) protein (745aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Helicase, RecD/TraA family n=2 Tax=Clostridium perfringens RepID=Q0TND6_CLOP1
recombinase D
L2_013_015G1_scaffold_0_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20209..21171
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGF9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27016.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_015G1_scaffold_0_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21147..21806
DNA (660bp) protein (220aa)
ComF family protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTF6_CLOPF
competence protein FC
ComF protein, homolog {ECO:0000313|EMBL:EDT23929.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_015G1_scaffold_0_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22255..22794
DNA (540bp) protein (180aa)
Ribosomal subunit interface protein n=8 Tax=Clostridium perfringens RepID=H7CYJ6_CLOPF
raiA; ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIA16374.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_015G1_scaffold_0_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23032..25554
DNA (2523bp) protein (841aa)
Protein translocase subunit SecA n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKC4_CLOPF
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
secA; preprotein translocase subunit SecA
L2_013_015G1_scaffold_0_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25808..25930
DNA (123bp) protein (41aa)
Peptide chain release factor 2 n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=RF2_CLOPS
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000255|HAMAP-Rule:MF_00094}; Short=RF-2 {ECO:0000255|HAMAP-Rule:MF_00094};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_015G1_scaffold_0_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25932..26903
DNA (972bp) protein (324aa)
peptide chain release factor 2 n=1 Tax=Clostridium perfringens RepID=UPI0000DB5E22
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_015G1_scaffold_0_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27040..28383)
DNA (1344bp) protein (448aa)
Peptidase family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNE2_CLOP1
peptidase
Peptidase family protein {ECO:0000313|EMBL:EDS79815.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_013_015G1_scaffold_0_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28495..30657
DNA (2163bp) protein (721aa)
RNA-binding protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR14_CLOPS
RNA-binding protein {ECO:0000313|EMBL:ABG87066.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
transcription accessory protein
Displaying items 1-30 of 568 in total

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