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L2_013_015G1_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_015G1_scaffold_21_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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72..1613
DNA (1542bp) protein (514aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CWG1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16946.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_015G1_scaffold_21_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1693..3123
DNA (1431bp) protein (477aa)
cls; cardiolipin synthase (EC:2.7.8.-)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Cardiolipin synthase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPQ5_CLOPF
L2_013_015G1_scaffold_21_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3281..4906)
DNA (1626bp) protein (542aa)
Pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R6S9_CLOPF
Pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EDT24004.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
pyridine nucleotide-disulfide oxidoreductase
L2_013_015G1_scaffold_21_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5107..6384)
DNA (1278bp) protein (426aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hemL; glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=4 Tax=Clostridium perfringens RepID=B1R6T0_CLOPF
L2_013_015G1_scaffold_21_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6447..7412)
DNA (966bp) protein (322aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Delta-aminolevulinic acid dehydratase n=10 Tax=Clostridium perfringens RepID=H7CWG5_CLOPF
L2_013_015G1_scaffold_21_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7469..8947)
DNA (1479bp) protein (493aa)
hemD; uroporphyrinogen-III methyltransferase/synthase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen III synthase/methyltransferase n=1 Tax=Clostridium perfringens F262 RepID=H7CWG6_CLOPF
Uroporphyrinogen III synthase/methyltransferase {ECO:0000313|EMBL:EIA16951.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_015G1_scaffold_21_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8956..9831)
DNA (876bp) protein (292aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
Porphobilinogen deaminase n=4 Tax=Clostridium perfringens RepID=HEM3_CLOP1
L2_013_015G1_scaffold_21_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10047..10703)
DNA (657bp) protein (219aa)
Precorrin-2 dehydrogenase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R6T3_CLOPF
Precorrin-2 dehydrogenase {ECO:0000313|EMBL:EDT24005.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
precorrin-2 dehydrogenase
L2_013_015G1_scaffold_21_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10667..11869)
DNA (1203bp) protein (401aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=2 Tax=Clostridium perfringens RepID=B1BN69_CLOPF
L2_013_015G1_scaffold_21_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12051..13031)
DNA (981bp) protein (327aa)
Anaerobic sulfite reductase, subunit C n=9 Tax=Clostridium perfringens RepID=Q0TQG1_CLOP1
arsC; anaerobic sulfite reductase subunit C
Anaerobic sulfite reductase, subunit C {ECO:0000313|EMBL:EDT26263.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_015G1_scaffold_21_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13045..13836)
DNA (792bp) protein (264aa)
Anaerobic sulfite reductase subunit B n=2 Tax=Clostridium perfringens RepID=H7CWH1_CLOPF
Anaerobic sulfite reductase subunit B {ECO:0000313|EMBL:EIA16956.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
asrB; anaerobic sulfite reductase subunit B
L2_013_015G1_scaffold_21_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13829..14845)
DNA (1017bp) protein (339aa)
Anaerobic sulfite reductase subunit A n=3 Tax=Clostridium perfringens RepID=Q8XKG0_CLOPE
asrA; anaerobic sulfite reductase subunit A
Anaerobic sulfite reductase subunit A {ECO:0000313|EMBL:BAB81146.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_015G1_scaffold_21_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15086..15778)
DNA (693bp) protein (231aa)
Transcriptional regulator, Crp/Fnr family n=2 Tax=Clostridium perfringens RepID=B1BN65_CLOPF
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EDS78725.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Crp/Fnr family transcriptional regulator
L2_013_015G1_scaffold_21_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15996..16793)
DNA (798bp) protein (266aa)
Formate/nitrite transporter n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V795_CLOPF
Formate/nitrite transporter {ECO:0000313|EMBL:EDT70304.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
fnt; formate/nitrite transporter
L2_013_015G1_scaffold_21_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17001..17621)
DNA (621bp) protein (207aa)
Putative membrane protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIG0_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT26262.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_013_015G1_scaffold_21_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17599..17892)
DNA (294bp) protein (98aa)
GIY-YIG domain protein n=2 Tax=Clostridium perfringens RepID=Q0TQF5_CLOP1
GIY-YIG domain-containing protein
GIY-YIG domain protein {ECO:0000313|EMBL:ABG86894.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_015G1_scaffold_21_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18143..20203
DNA (2061bp) protein (687aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIG2_CLOPF
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDT26252.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
AraC family transcriptional regulator
L2_013_015G1_scaffold_21_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20866..22131)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKF4_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81152.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_015G1_scaffold_21_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22148..23449)
DNA (1302bp) protein (434aa)
Helix-turn-helix domain-containing protein n=7 Tax=Clostridium perfringens RepID=H7CWH9_CLOPF
DNA-binding protein {ECO:0000313|EMBL:EDT14882.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
helix-turn-helix domain-containing protein
L2_013_015G1_scaffold_21_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23746..23937)
DNA (192bp) protein (64aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=Q0ST03_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87148.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_015G1_scaffold_21_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23986..24615)
DNA (630bp) protein (210aa)
Ribonuclease H-related protein n=4 Tax=Clostridium perfringens RepID=H7CWI1_CLOPF
Ribonuclease H-related protein {ECO:0000313|EMBL:EIA16966.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
ribonuclease H-like protein
L2_013_015G1_scaffold_21_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24630..25601)
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CR42_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26259.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_015G1_scaffold_21_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25786..26814)
DNA (1029bp) protein (343aa)
Rhomboid family protein n=3 Tax=Clostridium perfringens RepID=B1RIG8_CLOPF
Rhomboid family protein {ECO:0000313|EMBL:EDT26276.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
rhomboid family protein
L2_013_015G1_scaffold_21_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26832..28631)
DNA (1800bp) protein (600aa)
pepF; oligoendopeptidase F (EC:3.4.24.-)
Oligoendopeptidase F {ECO:0000313|EMBL:ABG86713.1}; EC=3.4.24.- {ECO:0000313|EMBL:ABG86713.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Oligoendopeptidase F n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SSZ9_CLOPS
L2_013_015G1_scaffold_21_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28652..29050)
DNA (399bp) protein (133aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CWI5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16970.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_013_015G1_scaffold_21_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29220..29555
DNA (336bp) protein (112aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CWI6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14858.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_015G1_scaffold_21_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29629..30297
DNA (669bp) protein (223aa)
ABC-type iron (III) transport system, ATPase n=4 Tax=Clostridium perfringens RepID=H7CWI7_CLOPF
ABC-type iron (III) transport system, ATPase
Putative zinc ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABG87446.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_015G1_scaffold_21_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30316..31125
DNA (810bp) protein (270aa)
Metal (Zinc) transport protein (ABC transporter permease) zurM n=10 Tax=Clostridium perfringens RepID=H7CWI8_CLOPF
metal (zinc) transport protein (ABC transporter permease) zurM
Probable ABC transporter {ECO:0000313|EMBL:BAB81163.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_015G1_scaffold_21_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31320..32750)
DNA (1431bp) protein (477aa)
MATE efflux family protein n=3 Tax=Clostridium perfringens RepID=H7CWI9_CLOPF
MATE efflux family protein {ECO:0000313|EMBL:EIA16974.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
MATE efflux family protein
L2_013_015G1_scaffold_21_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32991..35414)
DNA (2424bp) protein (808aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPY9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS78724.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
Displaying items 1-30 of 138 in total

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