ggKbase home page

L2_013_015G1_scaffold_73

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_015G1_scaffold_73_1
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45..482)
DNA (438bp) protein (146aa)
UPI0003D6065E related cluster n=1 Tax=unknown RepID=UPI0003D6065E
Uncharacterized protein {ECO:0000313|EMBL:ETJ00919.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
L2_013_015G1_scaffold_73_2
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(482..1105)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7U4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EEH65198.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
L2_013_015G1_scaffold_73_3
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1509..3410)
DNA (1902bp) protein (634aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:EEH65199.1}; EC=2.4.1.109 {ECO:0000313|EMBL:EEH65199.1};; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
Dolichyl-phosphate-mannose-protein mannosyltransferase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7U5_9ACTO
dolichyl-phosphate-mannose-mannosyltransferase
L2_013_015G1_scaffold_73_4
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3463..4377
DNA (915bp) protein (305aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
S-adenosylmethionine-dependent methyltransferase, YraL family n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7U6_9ACTO
uroporphyrin-III C/tetrapyrrole methyltransferase
L2_013_015G1_scaffold_73_5
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4505..5236)
DNA (732bp) protein (244aa)
UPI0003D5BC81 related cluster n=1 Tax=unknown RepID=UPI0003D5BC81
Uncharacterized protein {ECO:0000313|EMBL:KGF02497.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
L2_013_015G1_scaffold_73_6
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5397..7238
DNA (1842bp) protein (614aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
Methionine--tRNA ligase n=3 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7U8_9ACTO
methionyl-tRNA synthetase
L2_013_015G1_scaffold_73_7
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7254..8249
DNA (996bp) protein (332aa)
Hydrolase, TatD family (Fragment) n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7V0_9ACTO
Hydrolase, TatD family {ECO:0000313|EMBL:EEH65192.1}; Flags: Fragment;; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
TatD-related deoxyribonuclease
L2_013_015G1_scaffold_73_8
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8470..9258
DNA (789bp) protein (263aa)
G5 domain protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7V1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGF02495.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
hypothetical protein
L2_013_015G1_scaffold_73_9
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9432..10268
DNA (837bp) protein (279aa)
Transglycosylase-like domain protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7V2_9ACTO
Transglycosylase-like domain protein {ECO:0000313|EMBL:EEH65194.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
transglycosylase
L2_013_015G1_scaffold_73_10
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10310..11242
DNA (933bp) protein (311aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7V3_9ACTO
dimethyladenosine transferase
L2_013_015G1_scaffold_73_11
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11239..12279
DNA (1041bp) protein (347aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
hypothetical protein n=1 Tax=Actinomyces timonensis RepID=UPI0002F8B481
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L2_013_015G1_scaffold_73_12
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12279..14165
DNA (1887bp) protein (629aa)
ABC transporter, ATP-binding protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7V6_9ACTO
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:KGF02492.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
ABC transporter-like protein
L2_013_015G1_scaffold_73_13
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14324..14953)
DNA (630bp) protein (210aa)
Transcriptional regulator, TetR family n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7V7_9ACTO
TetR family transcriptional regulator {ECO:0000313|EMBL:KGF02491.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
TetR family transcriptional regulator
L2_013_015G1_scaffold_73_14
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15353..16336
DNA (984bp) protein (328aa)
Putative UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7V8_9ACTO
Putative UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase {ECO:0000313|EMBL:EEH65184.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
UDP-N-acetylglucosamine pyrophosphorylase
L2_013_015G1_scaffold_73_15
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16403..17386
DNA (984bp) protein (328aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7V9_9ACTO
L2_013_015G1_scaffold_73_16
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17868..18173
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7W0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETJ04272.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
L2_013_015G1_scaffold_73_17
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18182..19057
DNA (876bp) protein (292aa)
UPI0003D5E6BD related cluster n=1 Tax=unknown RepID=UPI0003D5E6BD
Uncharacterized protein {ECO:0000313|EMBL:ETJ04271.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
hypothetical protein
L2_013_015G1_scaffold_73_18
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19378..23130
DNA (3753bp) protein (1251aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
Transcription-repair-coupling factor n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7W3_9ACTO
transcription-repair coupling factor
L2_013_015G1_scaffold_73_19
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23190..23735
DNA (546bp) protein (182aa)
UPI00030917C2 related cluster n=1 Tax=unknown RepID=UPI00030917C2
Uncharacterized protein {ECO:0000313|EMBL:ETJ07381.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
L2_013_015G1_scaffold_73_20
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23867..25153
DNA (1287bp) protein (429aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
eno; enolase (EC:4.2.1.11)
Enolase n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7W5_9ACTO
L2_013_015G1_scaffold_73_21
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25582..26088
DNA (507bp) protein (169aa)
UPI0003D5F919 related cluster n=1 Tax=unknown RepID=UPI0003D5F919
Putative septum formation initiator {ECO:0000313|EMBL:ETJ03732.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
Septum formation initiator
L2_013_015G1_scaffold_73_22
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26123..26707
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7N0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETJ03731.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
hypothetical protein
L2_013_015G1_scaffold_73_23
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26830..27819
DNA (990bp) protein (330aa)
Ppx/GppA phosphatase family protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7M9_9ACTO
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:EEH65264.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
Ppx/GppA phosphatase
L2_013_015G1_scaffold_73_24
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27816..28781
DNA (966bp) protein (322aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
UPI0003D5B1C2 related cluster n=1 Tax=unknown RepID=UPI0003D5B1C2
3-dehydroquinate dehydratase {ECO:0000313|EMBL:ETJ06416.1}; Flags: Fragment;; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
L2_013_015G1_scaffold_73_25
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


28984..29607
DNA (624bp) protein (208aa)
50S ribosomal protein L25 n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7W7_9ACTO
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
50S ribosomal protein L25
L2_013_015G1_scaffold_73_26
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29675..30271
DNA (597bp) protein (199aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7W8_9ACTO
L2_013_015G1_scaffold_73_27
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30290..31030)
DNA (741bp) protein (247aa)
UPI0003D67D2B related cluster n=1 Tax=unknown RepID=UPI0003D67D2B
Response regulator {ECO:0000313|EMBL:ETJ06387.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
two component LuxR family transcriptional regulator
L2_013_015G1_scaffold_73_28
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31012..32568)
DNA (1557bp) protein (519aa)
Histidine kinase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7X0_9ACTO
Histidine kinase {ECO:0000313|EMBL:KGF02478.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
histidine kinase
L2_013_015G1_scaffold_73_29
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32634..33491)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7X1_9ACTO
ABC transporter permease {ECO:0000313|EMBL:KGF02477.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
ABC transporter
L2_013_015G1_scaffold_73_30
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33542..34486)
DNA (945bp) protein (315aa)
ABC transporter, ATP-binding protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7X2_9ACTO
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGF02476.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
ABC transporter
Displaying items 1-30 of 63 in total

View Taxonomy