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L2_013_015G1_scaffold_184

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_015G1_scaffold_184_1
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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3..986
DNA (984bp) protein (328aa)
CoA-transferase family III n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5X803_9ACTN
L-carnitine dehydratase/bile acid-inducible protein F
Uncharacterized protein {ECO:0000313|EMBL:KGI74228.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L2_013_015G1_scaffold_184_2
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1139..2413
DNA (1275bp) protein (425aa)
Major facilitator superfamily MFS_1 n=3 Tax=Bacteria RepID=C8WNN5_EGGLE
major facilitator superfamily protein
Transporter, major facilitator family protein {ECO:0000313|EMBL:EGC88337.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_015G1_scaffold_184_3
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2623..3384)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5X801_9ACTN
Conserved domain protein {ECO:0000313|EMBL:EGC88391.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
DnaK; molecular chaperone
L2_013_015G1_scaffold_184_4
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3515..4756
DNA (1242bp) protein (414aa)
L-carnitine dehydratase/bile acid-inducible protein F n=3 Tax=Bacteria RepID=C8WNN4_EGGLE
L-carnitine dehydratase/bile acid-inducible protein F
Putative bile acid-CoA hydrolase {ECO:0000313|EMBL:EGC88295.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_015G1_scaffold_184_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4978..6243
DNA (1266bp) protein (422aa)
Major Facilitator Superfamily protein n=1 Tax=Clostridium difficile F501 RepID=T4BPK7_CLODI
Major Facilitator Superfamily protein {ECO:0000313|EMBL:EQI11902.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
major facilitator superfamily protein
L2_013_015G1_scaffold_184_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6347..8443
DNA (2097bp) protein (699aa)
Flavin oxidoreductase / NADH oxidase family protein n=1 Tax=Clostridium difficile F501 RepID=T4BVI2_CLODI
Flavin oxidoreductase / NADH oxidase family protein {ECO:0000313|EMBL:EQI11839.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
NADH:flavin oxidoreductase
L2_013_015G1_scaffold_184_7
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8566..9312
DNA (747bp) protein (249aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Clostridium difficile F501 RepID=T4BVE7_CLODI
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:EGC88312.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_015G1_scaffold_184_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9334..11922
DNA (2589bp) protein (863aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Clostridium difficile F501 RepID=T4BPR5_CLODI
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:EQI11957.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
AMP-dependent synthetase and ligase
L2_013_015G1_scaffold_184_9
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11950..13125
DNA (1176bp) protein (392aa)
Acyl-CoA dehydrogenase domain protein n=3 Tax=Bacteria RepID=C8WNA1_EGGLE
putative acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACV56824.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_013_015G1_scaffold_184_10
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13139..13936
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5X7Z4_9ACTN
wyosine base formation
TIGR03084 family protein {ECO:0000313|EMBL:EGC88381.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_015G1_scaffold_184_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13983..14411)
DNA (429bp) protein (143aa)
Acetyltransferase family protein n=1 Tax=Clostridium difficile F501 RepID=T4BVW4_CLODI
Acetyltransferase family protein {ECO:0000313|EMBL:EQI11989.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
N-acetyltransferase GCN5
L2_013_015G1_scaffold_184_12
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14608..16029
DNA (1422bp) protein (474aa)
RNA polymerase sigma-54 factor n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5X7Z2_9ACTN
RNA polymerase sigma 54 subunit RpoN
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EGC88369.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_015G1_scaffold_184_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16060..18102
DNA (2043bp) protein (681aa)
Sigma-54 interaction domain-containing protein n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5X7Z1_9ACTN
AAA domain family protein {ECO:0000313|EMBL:EQI11872.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
putative sigma-54 specific transcriptional regulator
L2_013_015G1_scaffold_184_14
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18181..18948
DNA (768bp) protein (256aa)
Electron transfer flavoprotein alpha/beta-subunit n=4 Tax=Bacteria RepID=C8WN96_EGGLE
Electron transfer flavoprotein alpha/beta-subunit
Electron transfer flavoprotein domain protein {ECO:0000313|EMBL:EGC88336.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_015G1_scaffold_184_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18959..19876
DNA (918bp) protein (306aa)
Electron transfer flavodomain protein n=1 Tax=Clostridium difficile F501 RepID=T4BRJ4_CLODI
Electron transfer flavodomain protein {ECO:0000313|EMBL:EQI11890.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
electron transfer flavoprotein subunit alpha
L2_013_015G1_scaffold_184_16
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19958..20296)
DNA (339bp) protein (113aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=C8WN94_EGGLE
hypothetical protein
Putative toxin-antitoxin system, antitoxin component {ECO:0000313|EMBL:EGC88371.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_015G1_scaffold_184_17
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20286..20573)
DNA (288bp) protein (96aa)
DNA polymerase beta domain protein region n=4 Tax=Bacteria RepID=C8WN93_EGGLE
DNA polymerase beta domain-containing protein
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:EGC88308.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_015G1_scaffold_184_18
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20604..21182)
DNA (579bp) protein (193aa)
Transcriptional regulator, TetR family n=4 Tax=Bacteria RepID=C8WN92_EGGLE
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EGC88317.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_015G1_scaffold_184_19
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21374..21865
DNA (492bp) protein (164aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=C8WN91_EGGLE
hypothetical protein
TIGR03987 family protein {ECO:0000313|EMBL:EGC88386.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_015G1_scaffold_184_20
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21958..22962)
DNA (1005bp) protein (335aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Histidine kinase n=4 Tax=Bacteria RepID=C8WN90_EGGLE
histidine kinase
Displaying 20 items

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