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L2_013_015G1_scaffold_149

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_015G1_scaffold_149_1
unknown

Not on your lists

3..386
DNA (384bp) protein (128aa)

This feature has no annotations

L2_013_015G1_scaffold_149_2
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(445..753)
DNA (309bp) protein (103aa)
Uncharacterized protein n=28 Tax=Lactobacillus casei group RepID=K0N589_LACCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC16038.1}; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
L2_013_015G1_scaffold_149_3
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(922..1233)
DNA (312bp) protein (104aa)
Uncharacterized protein n=21 Tax=Lactobacillus casei group RepID=D8GGX6_LACCZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ12071.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
L2_013_015G1_scaffold_149_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1484..2263)
DNA (780bp) protein (260aa)
DNA repair protein RecO n=15 Tax=Lactobacillus casei group RepID=S4ZTE0_LACCA
DNA recombination and repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L2_013_015G1_scaffold_149_5
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2263..3165)
DNA (903bp) protein (301aa)
GTPase Era n=33 Tax=Lactobacillus casei group RepID=C5F5B1_LACPA
GTP-binding protein
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L2_013_015G1_scaffold_149_6
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3162..3551)
DNA (390bp) protein (130aa)
Cytidine deaminase n=49 Tax=Lactobacillus casei group RepID=B3WEL2_LACCB
cytidine deaminase
Cytidine deaminase {ECO:0000313|EMBL:EPD07364.1}; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
L2_013_015G1_scaffold_149_7
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3553..3951)
DNA (399bp) protein (133aa)
diacylglycerol kinase (EC:2.7.1.107)
Diacylglycerol kinase {ECO:0000313|EMBL:EKQ12075.1}; EC=2.7.1.107 {ECO:0000313|EMBL:EKQ12075.1};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Diacylglycerol kinase n=55 Tax=Lactobacillus casei group RepID=B3WEL3_LACCB
L2_013_015G1_scaffold_149_8
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3935..4393)
DNA (459bp) protein (153aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
Endoribonuclease YbeY n=36 Tax=Lactobacillus casei group RepID=YBEY_LACC3
Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly
L2_013_015G1_scaffold_149_9
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4397..5383)
DNA (987bp) protein (329aa)
Phosphate starvation-inducible protein PhoH, predicted ATPase n=5 Tax=Lactobacillus casei group RepID=Q038S8_LACC3
phosphate starvation-inducible protein PhoH, ATPase
PhoH family protein {ECO:0000313|EMBL:EPC69152.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
L2_013_015G1_scaffold_149_10
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5596..5760)
DNA (165bp) protein (55aa)
Uncharacterized protein n=3 Tax=Lactobacillus paracasei subsp. paracasei RepID=S6BZZ9_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI67448.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L2_013_015G1_scaffold_149_11
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5717..6160)
DNA (444bp) protein (148aa)
GatB/YqeY domain-containing protein n=26 Tax=Lactobacillus casei group RepID=C5F5A5_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC57748.1}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
L2_013_015G1_scaffold_149_12
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6180..6356)
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=1 Tax=Lactobacillus paracasei subsp. paracasei CNCM I-4270 RepID=S2QNZ6_LACPA
SSU ribosomal protein S21p
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L2_013_015G1_scaffold_149_13
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6660..7490
DNA (831bp) protein (277aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.4.27 {ECO:0000256|HAMAP-Rule:MF_00921};; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
Putative pyruvate, phosphate dikinase regulatory protein n=47 Tax=Lactobacillus casei group RepID=PDRP_LACC3
ATP/GTP-binding protein
L2_013_015G1_scaffold_149_14
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7487..8374)
DNA (888bp) protein (296aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
endonuclease IV (EC:3.1.21.- 3.1.21.2)
Probable endonuclease 4 n=7 Tax=Lactobacillus casei group RepID=K6QUS0_LACCA
L2_013_015G1_scaffold_149_15
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8510..9430)
DNA (921bp) protein (307aa)
UPF0750 membrane protein yitT n=50 Tax=Lactobacillus casei group RepID=K0N8V8_LACCA
Integral membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EPC84948.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L2_013_015G1_scaffold_149_16
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9522..9974)
DNA (453bp) protein (151aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
Peptide methionine sulfoxide reductase MsrB n=23 Tax=Lactobacillus casei group RepID=B3WEM1_LACCB
Peptide methionine sulfoxide reductase MsrA/msrB
L2_013_015G1_scaffold_149_17
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(10063..11868)
DNA (1806bp) protein (602aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EKQ12084.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EKQ12084.1};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=26 Tax=Lactobacillus casei group RepID=SYD_LACC3
L2_013_015G1_scaffold_149_18
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(11870..13153)
DNA (1284bp) protein (428aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
Histidine--tRNA ligase n=30 Tax=Lactobacillus casei group RepID=SYH_LACC3
hisS; Histidyl-tRNA synthetase 2
L2_013_015G1_scaffold_149_19
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13673..13999
DNA (327bp) protein (109aa)
Inorganic pyrophosphatase {ECO:0000313|EMBL:EKQ10132.1}; EC=3.6.1.1 {ECO:0000313|EMBL:EKQ10132.1};; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
Inorganic pyrophosphatase n=29 Tax=Lactobacillus casei group RepID=Q038R9_LACC3
inorganic pyrophosphatase
L2_013_015G1_scaffold_149_20
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14050..14967)
DNA (918bp) protein (306aa)
Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) n=20 Tax=Lactobacillus casei group RepID=B3WEM5_LACCB
Zinc alcohol dehydrogenase, putative
GroES-like protein {ECO:0000313|EMBL:EEI67437.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L2_013_015G1_scaffold_149_21
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14964..15407)
DNA (444bp) protein (148aa)
Uncharacterized protein n=18 Tax=Lactobacillus casei group RepID=Q038R7_LACC3
polyketide cyclase
Uncharacterized protein {ECO:0000313|EMBL:EEI67436.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L2_013_015G1_scaffold_149_22
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15483..16220)
DNA (738bp) protein (246aa)
XRE family transcriptional regulator n=21 Tax=Lactobacillus casei group RepID=K0N5F8_LACCA
hypothetical protein
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEI67435.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L2_013_015G1_scaffold_149_23
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16427..17932)
DNA (1506bp) protein (502aa)
Permease component of an ABC superfamily transporter n=3 Tax=Lactobacillus casei group RepID=K6S153_LACCA
ABC transporter permease
Permease component of an ABC superfamily transporter {ECO:0000313|EMBL:EKQ18959.1}; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
L2_013_015G1_scaffold_149_24
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17929..18804)
DNA (876bp) protein (292aa)
Uncharacterized protein n=25 Tax=Lactobacillus casei group RepID=K0N8X3_LACCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP68399.1}; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
L2_013_015G1_scaffold_149_25
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19098..19490
DNA (393bp) protein (131aa)
Histidine triad (HIT) protein n=16 Tax=Lactobacillus casei group RepID=B3WEN0_LACCB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC52991.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L2_013_015G1_scaffold_149_26
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19629..20951
DNA (1323bp) protein (441aa)
N-acetylmuramoyl-L-alanine amidase n=8 Tax=Lactobacillus casei group RepID=Q038R1_LACC3
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:BAN71757.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
L2_013_015G1_scaffold_149_27
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21024..21653)
DNA (630bp) protein (210aa)
Phosphoglycolate phosphatase n=43 Tax=Lactobacillus casei group RepID=F2M5M9_LACCC
phosphoglycolate phosphatase
Haloacid dehalogenase-like family hydrolase {ECO:0000313|EMBL:EKQ12092.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
L2_013_015G1_scaffold_149_28
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21650..22096)
DNA (447bp) protein (149aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1435040 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 1981.;"
D-tyrosyl-tRNA(Tyr) deacylase n=39 Tax=Lactobacillus casei group RepID=DTD_LACC3
D-tyrosyl-tRNA-Tyr deacylase
L2_013_015G1_scaffold_149_29
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22217..24445)
DNA (2229bp) protein (743aa)
GTP pyrophosphokinase, (p)ppGpp synthetase I (EC:3.1.4.- 2.7.6.5)
GTP pyrophosphokinase n=25 Tax=Lactobacillus casei group RepID=C5F590_LACPA
GTP pyrophosphokinase {ECO:0000313|EMBL:AGP68404.1}; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
L2_013_015G1_scaffold_149_30
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24682..25005)
DNA (324bp) protein (108aa)
Uncharacterized protein n=48 Tax=Lactobacillus casei group RepID=C5F589_LACPA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ12095.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Displaying items 1-30 of 39 in total

View Taxonomy