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L2_013_033G1_scaffold_19

Search features with annotation key words

Displaying items 1-30 of 195 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_033G1_scaffold_19_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(353..1261)
DNA (909bp) protein (303aa)
UPI0003D66D60 related cluster n=1 Tax=unknown RepID=UPI0003D66D60
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ETI82944.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
lipase/esterase
L2_013_033G1_scaffold_19_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1281..2093)
DNA (813bp) protein (271aa)
UPI0003D5F671 related cluster n=1 Tax=unknown RepID=UPI0003D5F671
Uncharacterized protein {ECO:0000313|EMBL:ETI82943.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
alpha/beta hydrolase
L2_013_033G1_scaffold_19_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2119..3492)
DNA (1374bp) protein (458aa)
UPI0003D5F328 related cluster n=1 Tax=unknown RepID=UPI0003D5F328
MFS transporter, sugar porter family protein {ECO:0000313|EMBL:ETI82942.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Putative metabolite transport protein ywtG
L2_013_033G1_scaffold_19_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3848..4618
DNA (771bp) protein (257aa)
UPI0003D630AD related cluster n=1 Tax=unknown RepID=UPI0003D630AD
Regulatory protein GntR HTH {ECO:0000313|EMBL:ETI82941.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
regulatory protein GntR HTH
L2_013_033G1_scaffold_19_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4673..5155)
DNA (483bp) protein (161aa)
UPI0003D62782 related cluster n=1 Tax=unknown RepID=UPI0003D62782
Hydrolase, alpha/beta protein {ECO:0000313|EMBL:ETI82940.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Hydrolase
L2_013_033G1_scaffold_19_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5160..5480)
DNA (321bp) protein (107aa)
UPI0003D62782 related cluster n=1 Tax=unknown RepID=UPI0003D62782
Hydrolase, alpha/beta protein {ECO:0000313|EMBL:ETI82940.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Hydrolase
L2_013_033G1_scaffold_19_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5641..7167)
DNA (1527bp) protein (509aa)
UPI0003D6587E related cluster n=1 Tax=unknown RepID=UPI0003D6587E
Uncharacterized protein {ECO:0000313|EMBL:ETI82939.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
sodium-coupled N-acetylneuraminate transporter
L2_013_033G1_scaffold_19_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7552..8469
DNA (918bp) protein (306aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
UPI0003D61CDE related cluster n=1 Tax=unknown RepID=UPI0003D61CDE
Uncharacterized protein {ECO:0000313|EMBL:ETI82938.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_013_033G1_scaffold_19_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8466..9404
DNA (939bp) protein (313aa)
UPI0003D67E82 related cluster n=1 Tax=unknown RepID=UPI0003D67E82
Glucokinase {ECO:0000313|EMBL:ETI82937.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ROK family protein
L2_013_033G1_scaffold_19_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9407..10081
DNA (675bp) protein (225aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D6541A related cluster n=1 Tax=unknown RepID=UPI0003D6541A
N-acetylmannosamine-6-phosphate 2-epimerase
L2_013_033G1_scaffold_19_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10307..13624)
DNA (3318bp) protein (1106aa)
UPI0003D6621A related cluster n=1 Tax=unknown RepID=UPI0003D6621A
Uncharacterized protein {ECO:0000313|EMBL:ETI82935.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_013_033G1_scaffold_19_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13731..15812)
DNA (2082bp) protein (694aa)
UPI0003D6621A related cluster n=1 Tax=unknown RepID=UPI0003D6621A
Uncharacterized protein {ECO:0000313|EMBL:ETI82935.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
carbohydrate-binding protein
L2_013_033G1_scaffold_19_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15850..21360)
DNA (5511bp) protein (1837aa)
UPI0003D5A161 related cluster n=1 Tax=unknown RepID=UPI0003D5A161
Uncharacterized protein {ECO:0000313|EMBL:ETI82934.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
lacto-N-biosidase
L2_013_033G1_scaffold_19_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21554..28405)
DNA (6852bp) protein (2284aa)
UPI0003D637EF related cluster n=1 Tax=unknown RepID=UPI0003D637EF
Uncharacterized protein {ECO:0000313|EMBL:ETI82933.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
nagZ; beta_N-acetylhexosaminidase
L2_013_033G1_scaffold_19_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28481..32659)
DNA (4179bp) protein (1393aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
UPI0003D60F98 related cluster n=1 Tax=unknown RepID=UPI0003D60F98
Uncharacterized protein {ECO:0000313|EMBL:ETI82932.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_013_033G1_scaffold_19_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32791..36048)
DNA (3258bp) protein (1086aa)
UPI0003D622A8 related cluster n=1 Tax=unknown RepID=UPI0003D622A8
Uncharacterized protein {ECO:0000313|EMBL:ETI82931.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
alpha-L-fucosidase
L2_013_033G1_scaffold_19_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36251..37258)
DNA (1008bp) protein (336aa)
UPI0003D6398A related cluster n=1 Tax=unknown RepID=UPI0003D6398A
Aldose epimerase {ECO:0000313|EMBL:ETI82930.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
aldose epimerase
L2_013_033G1_scaffold_19_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(37352..40249)
DNA (2898bp) protein (966aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
leuS; leucine--tRNA ligase (EC:6.1.1.4)
UPI0003D6784B related cluster n=1 Tax=unknown RepID=UPI0003D6784B
L2_013_033G1_scaffold_19_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40391..41278)
DNA (888bp) protein (296aa)
UPI0003D64C8A related cluster n=1 Tax=unknown RepID=UPI0003D64C8A
Cell division protein FtsQ, nonfunctional {ECO:0000313|EMBL:ETI82928.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ftsQ; cell division protein FtsQ
L2_013_033G1_scaffold_19_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41275..42681)
DNA (1407bp) protein (469aa)
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Varibaculum cambriense RepID=UPI0003B331CD
UDP-N-acetylmuramate-L-alanine ligase {ECO:0000313|EMBL:ETI82926.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UDP-N-acetylmuramate--alanine ligase
L2_013_033G1_scaffold_19_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42678..43799)
DNA (1122bp) protein (374aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D68B07 related cluster n=1 Tax=unknown RepID=UPI0003D68B07
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
L2_013_033G1_scaffold_19_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43789..45135)
DNA (1347bp) protein (449aa)
UPI0003D628C8 related cluster n=1 Tax=unknown RepID=UPI0003D628C8
Uncharacterized protein {ECO:0000313|EMBL:ETI82924.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
spoVE; stage V sporulation protein E
L2_013_033G1_scaffold_19_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45138..46577)
DNA (1440bp) protein (480aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D63D9E related cluster n=1 Tax=unknown RepID=UPI0003D63D9E
UDP-N-acetylmuramoylalanine/D-glutamate ligase
L2_013_033G1_scaffold_19_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46574..47686)
DNA (1113bp) protein (371aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
UPI0003D60816 related cluster n=1 Tax=unknown RepID=UPI0003D60816
L2_013_033G1_scaffold_19_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47686..49215)
DNA (1530bp) protein (510aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D6752B related cluster n=1 Tax=unknown RepID=UPI0003D6752B
UDP-N-acetylmuramoylalanyl-D-glutamyl-2 C 6-diaminopimelate/D-alanyl-D-alanyl ligase
L2_013_033G1_scaffold_19_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49255..51201)
DNA (1947bp) protein (649aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
UPI0003D5A93E related cluster n=1 Tax=unknown RepID=UPI0003D5A93E
Uncharacterized protein {ECO:0000313|EMBL:ETI82920.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_013_033G1_scaffold_19_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51211..51633)
DNA (423bp) protein (141aa)
UPI0003D66719 related cluster n=1 Tax=unknown RepID=UPI0003D66719
Uncharacterized protein {ECO:0000313|EMBL:ETI82919.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_013_033G1_scaffold_19_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51626..52621)
DNA (996bp) protein (332aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D628C1 related cluster n=1 Tax=unknown RepID=UPI0003D628C1
S-adenosyl-methyltransferase MraW
L2_013_033G1_scaffold_19_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52742..53173)
DNA (432bp) protein (144aa)
UPI0003D61C2A related cluster n=1 Tax=unknown RepID=UPI0003D61C2A
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
mraZ; cell division protein MraZ
L2_013_033G1_scaffold_19_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53512..53934)
DNA (423bp) protein (141aa)
UPI0003D639CC related cluster n=1 Tax=unknown RepID=UPI0003D639CC
Uncharacterized protein {ECO:0000313|EMBL:ETI82916.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Displaying items 1-30 of 195 in total

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