ggKbase home page

L2_013_033G1_scaffold_32

Search features with annotation key words

Displaying items 1-30 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_033G1_scaffold_32_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..97
DNA (96bp) protein (32aa)
Elongation factor Tu n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MG92_9CLOT
tuf; translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_2
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


598..906
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=2 Tax=Clostridium RepID=K6TY96_9CLOT
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_013_033G1_scaffold_32_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


984..1613
DNA (630bp) protein (210aa)
50S ribosomal protein L3 n=4 Tax=Clostridium botulinum RepID=RL3_CLOBA
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1639..2259
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Clostridium colicanis 209318 RepID=N9XM61_9CLOT
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_033G1_scaffold_32_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2259..2552
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Clostridium colicanis 209318 RepID=N9XYW6_9CLOT
ribosomal L23 family protein
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_033G1_scaffold_32_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2618..3451
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Clostridium colicanis 209318 RepID=N9WCN5_9CLOT
rplB; ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_033G1_scaffold_32_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3494..3790
DNA (297bp) protein (99aa)
30S ribosomal protein S19 n=1 Tax=Clostridium colicanis 209318 RepID=N9WD76_9CLOT
rpsS; ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3816..4148
DNA (333bp) protein (111aa)
50S ribosomal protein L22 n=1 Tax=Clostridium sp. CAG:265 RepID=R6KHW9_9CLOT
rplV; ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4168..4833
DNA (666bp) protein (222aa)
30S ribosomal protein S3 n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=RS3_CLOB8
rpsC; ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4851..5285
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=1 Tax=Clostridium colicanis 209318 RepID=N9XYW2_9CLOT
rplP; ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5285..5497
DNA (213bp) protein (71aa)
50S ribosomal protein L29 n=1 Tax=Clostridium colicanis 209318 RepID=N9WCN0_9CLOT
rpmC; ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_033G1_scaffold_32_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5519..5773
DNA (255bp) protein (85aa)
30S ribosomal protein S17 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CF77_9CLOT
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_033G1_scaffold_32_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5808..6176
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Clostridium colicanis 209318 RepID=N9XXY5_9CLOT
rplN; ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6193..6507
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Clostridium colicanis 209318 RepID=N9XM56_9CLOT
rplX; ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6530..7069
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=4 Tax=Clostridium botulinum RepID=RL5_CLOBA
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000313|EMBL:AIY83832.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7086..7271
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Clostridium colicanis 209318 RepID=N9WCM7_9CLOT
rpsZ; 30S ribosomal protein S14 type Z
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7304..7702
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Clostridium colicanis 209318 RepID=N9WD69_9CLOT
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302, ECO:0000313|EMBL:AIY82831.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7771..8310
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Clostridium colicanis 209318 RepID=N9XXY3_9CLOT
rplF; ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8332..8691
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Clostridium colicanis 209318 RepID=N9XM52_9CLOT
rplR; ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8711..9208
DNA (498bp) protein (166aa)
30S ribosomal protein S5 n=1 Tax=Clostridium colicanis 209318 RepID=N9XYV5_9CLOT
rpsE; ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9221..9400
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=1 Tax=Clostridium colicanis 209318 RepID=N9WCM2_9CLOT
rpmD; ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_033G1_scaffold_32_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9419..9859
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=1 Tax=Clostridium colicanis 209318 RepID=N9WD65_9CLOT
rplO; ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9862..11127
DNA (1266bp) protein (422aa)
Protein translocase subunit SecY n=1 Tax=Clostridium colicanis 209318 RepID=N9XXX8_9CLOT
secY; preprotein translocase, SecY subunit
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_033G1_scaffold_32_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11152..11802
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Adenylate kinase n=1 Tax=Clostridium colicanis 209318 RepID=N9XM49_9CLOT
adenylate kinase family protein
L2_013_033G1_scaffold_32_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11802..12551
DNA (750bp) protein (250aa)
map; methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974, ECO:0000313|EMBL:AIY85159.1};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Methionine aminopeptidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H244_9CLOT
L2_013_033G1_scaffold_32_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12634..12984
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LPT4_CLOB8
putative ribosomal protein L14E
LSU ribosomal protein L14E {ECO:0000313|EMBL:KJU71500.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_033G1_scaffold_32_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12923..13141
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Clostridium colicanis 209318 RepID=N9WD60_9CLOT
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075, ECO:0000313|EMBL:AIY85087.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13181..13294
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=4 Tax=Clostridium RepID=L1QJU0_9CLOT
rpmJ; ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_033G1_scaffold_32_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13535..13900
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=1 Tax=Clostridium colicanis 209318 RepID=N9XXX2_9CLOT
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315, ECO:0000313|EMBL:AIY83295.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_32_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13916..14305
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=5 Tax=Clostridium RepID=U5MNL6_CLOSA
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310, ECO:0000313|EMBL:AIY83924.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 171 in total

View Taxonomy