ggKbase home page

L2_013_033G1_scaffold_53

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_033G1_scaffold_53_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

614..1306
DNA (693bp) protein (231aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CN80_CLOPF
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
sfsA; sugar fermentation stimulation protein A
L2_013_033G1_scaffold_53_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1725..2264
DNA (540bp) protein (180aa)
Hydrolase, NUDIX family n=2 Tax=Clostridium perfringens RepID=B1BEX9_CLOPF
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDS81636.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
NUDIX family hydrolase
L2_013_033G1_scaffold_53_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2675..3970
DNA (1296bp) protein (432aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=2 Tax=Clostridium perfringens RepID=B1RJB5_CLOPF
L2_013_033G1_scaffold_53_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4428..4646
DNA (219bp) protein (73aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XMU2_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17837.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_033G1_scaffold_53_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4649..5179
DNA (531bp) protein (177aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Signal peptidase I n=9 Tax=Clostridium perfringens RepID=H7CT36_CLOPF
L2_013_033G1_scaffold_53_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5204..7357
DNA (2154bp) protein (718aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CN85_CLOPF
ftsH; ATP-dependent metalloprotease FtsH
L2_013_033G1_scaffold_53_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7578..9698
DNA (2121bp) protein (707aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Putative helicase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RST1_CLOPF
helicase
L2_013_033G1_scaffold_53_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10153..10989
DNA (837bp) protein (279aa)
Amino acid ABC transporter, amino acid-binding protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RST2_CLOPF
amino acid ABC transporter substrate-binding protein
Probable amino acid ABC transporter {ECO:0000313|EMBL:BAB80306.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_033G1_scaffold_53_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11020..11694
DNA (675bp) protein (225aa)
His/Glu/Gln/Arg/opine ABC transporter permease n=2 Tax=Clostridium perfringens RepID=H7CT40_CLOPF
His/Glu/Gln/Arg/opine ABC transporter permease {ECO:0000313|EMBL:EIA17842.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
His/Glu/Gln/Arg/opine ABC transporter permease
L2_013_033G1_scaffold_53_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11688..12410
DNA (723bp) protein (241aa)
Amino acid ABC transporter, ATP-binding protein n=2 Tax=Clostridium perfringens RepID=B1RJC1_CLOPF
amino acid ABC transporter ATP-binding protein
Amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT25950.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_033G1_scaffold_53_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12628..14436
DNA (1809bp) protein (603aa)
Sulfatase family protein n=3 Tax=Clostridium perfringens RepID=Q0TTK3_CLOP1
Sulfatase family protein {ECO:0000313|EMBL:EDT22532.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
sulfatase
L2_013_033G1_scaffold_53_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14688..16532
DNA (1845bp) protein (615aa)
Sulfatase domain protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTK2_CLOP1
Sulfatase domain protein {ECO:0000313|EMBL:EDT14533.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
sulfatase
L2_013_033G1_scaffold_53_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16635..17816)
DNA (1182bp) protein (394aa)
Cation efflux family protein n=2 Tax=Clostridium perfringens RepID=B1BEZ7_CLOPF
Cation efflux family protein {ECO:0000313|EMBL:EDS81609.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
cation efflux family protein
L2_013_033G1_scaffold_53_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18055..19962
DNA (1908bp) protein (636aa)
Probable enterotoxin n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMT2_CLOPE
Probable enterotoxin {ECO:0000313|EMBL:BAB80312.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
entD; enterotoxin
L2_013_033G1_scaffold_53_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20104..21399
DNA (1296bp) protein (432aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
M18 family aminopeptidase n=3 Tax=Clostridium perfringens RepID=B1RST8_CLOPF
aminopeptidase 2
L2_013_033G1_scaffold_53_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21492..21686)
DNA (195bp) protein (65aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CT47_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14543.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_033G1_scaffold_53_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22076..22915
DNA (840bp) protein (280aa)
Cof-like hydrolase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CN99_CLOPF
HAD family hydrolase
Uncharacterized protein {ECO:0000313|EMBL:BAB80315.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_033G1_scaffold_53_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23130..26459)
DNA (3330bp) protein (1110aa)
Membrane protein, MmpL family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUT9_CLOPF
Membrane protein, MmpL family {ECO:0000313|EMBL:EDT14525.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
MmpL family membrane protein
L2_013_033G1_scaffold_53_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26720..28315)
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 n=10 Tax=Clostridium perfringens RepID=H7CT50_CLOPF
prfC; peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_033G1_scaffold_53_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28529..29134)
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CT51_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17853.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_033G1_scaffold_53_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29524..30324
DNA (801bp) protein (267aa)
Phosphatase YidA {ECO:0000313|EMBL:EDT14509.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDT14509.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
HAD family hydrolase n=7 Tax=Clostridium perfringens RepID=H7CT52_CLOPF
HAD family hydrolase
L2_013_033G1_scaffold_53_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30365..31027
DNA (663bp) protein (221aa)
Sugar transferase family protein n=6 Tax=Clostridium perfringens RepID=H7CT53_CLOPF
sugar transferase
Sugar transferase family protein {ECO:0000313|EMBL:EIA17855.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_033G1_scaffold_53_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31028..31942
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNA5_CLOPF
glycosyl transferase family protein
Probable rhamnosyl transferase {ECO:0000313|EMBL:BAB80321.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_033G1_scaffold_53_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31965..32852
DNA (888bp) protein (296aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Glucose-1-phosphate thymidylyltransferase n=2 Tax=Clostridium perfringens RepID=Q0TTJ0_CLOP1
rfbA; glucose-1-phosphate thymidylyltransferase
L2_013_033G1_scaffold_53_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32952..33521
DNA (570bp) protein (190aa)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EDS81610.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EDS81610.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BF09_CLOPF
L2_013_033G1_scaffold_53_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33535..34422
DNA (888bp) protein (296aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EDT27954.1}; EC=1.1.1.133 {ECO:0000313|EMBL:EDT27954.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDE7_CLOPF
L2_013_033G1_scaffold_53_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34450..35499
DNA (1050bp) protein (350aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
rfbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3X3_CLOPF
L2_013_033G1_scaffold_53_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35524..36756
DNA (1233bp) protein (411aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XMR8_CLOPE
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT22327.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_033G1_scaffold_53_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36735..37583
DNA (849bp) protein (283aa)
Glycosyl transferase, group 2 family protein n=3 Tax=Clostridium perfringens RepID=Q0TTI5_CLOP1
glycosyl transferase family protein
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EDT22329.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_033G1_scaffold_53_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37677..38417
DNA (741bp) protein (247aa)
Conserved domain protein n=5 Tax=Clostridium perfringens RepID=Q0TTI4_CLOP1
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EDT22332.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Displaying items 1-30 of 108 in total

View Taxonomy