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L2_013_033G1_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_033G1_scaffold_106_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..133)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BW11_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU70784.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_033G1_scaffold_106_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(242..2047)
DNA (1806bp) protein (602aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Elongation factor 4 n=1 Tax=Clostridium colicanis 209318 RepID=N9Y241_9CLOT
lepA; GTP-binding protein LepA
L2_013_033G1_scaffold_106_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2185..2559)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2I0_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82370.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_106_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2607..3686)
DNA (1080bp) protein (360aa)
Stage II sporulation protein P n=1 Tax=Clostridium colicanis 209318 RepID=N9WGN2_9CLOT
spoIIP; stage II sporulation P family protein
Stage II sporulation P family protein {ECO:0000313|EMBL:AIY83735.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_106_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3818..4792)
DNA (975bp) protein (325aa)
gpr; GPR endopeptidase (EC:3.4.24.78)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626, ECO:0000313|EMBL:AIY82567.1};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Germination protease n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EYE6_9CLOT
L2_013_033G1_scaffold_106_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4968..5231
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Clostridium colicanis 209318 RepID=N9XRC3_9CLOT
rpsT; ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_106_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5325..6359)
DNA (1035bp) protein (345aa)
holA; DNA polymerase III, delta subunit (EC:2.7.7.7)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:AIY84941.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AIY84941.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
DNA polymerase III, delta subunit n=1 Tax=Clostridium colicanis 209318 RepID=N9Y245_9CLOT
L2_013_033G1_scaffold_106_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6382..8076)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WHA5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AIY85000.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
hypothetical protein
L2_013_033G1_scaffold_106_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8131..8490)
DNA (360bp) protein (120aa)
Stage V sporulation protein AE n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A4M6_CLOBU
spoVAE; stage V sporulation protein AE
Stage V sporulation protein AE {ECO:0000313|EMBL:AIY82982.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_106_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8505..9533)
DNA (1029bp) protein (343aa)
Putative Stage V sporulation protein AD n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EPW5_9CLOT
spoVAD; stage V sporulation protein AD
Stage V sporulation protein AD {ECO:0000313|EMBL:AIY83218.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_106_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9561..10022)
DNA (462bp) protein (154aa)
Stage V sporulation protein AC n=1 Tax=Clostridium intestinale URNW RepID=U2Q711_9CLOT
spoVAC; stage V sporulation protein AC
Stage V sporulation protein AC {ECO:0000313|EMBL:AIY82971.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_106_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10164..11867)
DNA (1704bp) protein (568aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Hydroxylamine reductase n=2 Tax=Clostridium botulinum B RepID=B2TLF2_CLOBB
hcp; hydroxylamine reductase
L2_013_033G1_scaffold_106_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12036..12794)
DNA (759bp) protein (253aa)
RNA polymerase sigma factor n=4 Tax=Clostridium butyricum RepID=B1QX29_CLOBU
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
sigF; RNA polymerase sigma-F factor
L2_013_033G1_scaffold_106_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12810..13238)
DNA (429bp) protein (143aa)
spoIIAB; anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor {ECO:0000256|HAMAP-Rule:MF_00637}; EC=2.7.11.1 {ECO:0000256|HAMAP-Rule:MF_00637};; Stage II sporulation protein AB {ECO:0000256|HAMAP-Rule:MF_00637}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Anti-sigma F factor n=1 Tax=Clostridium colicanis 209318 RepID=N9WGN9_9CLOT
L2_013_033G1_scaffold_106_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13253..13657)
DNA (405bp) protein (135aa)
Anti-sigma F factor antagonist n=1 Tax=Clostridium sp. DL-VIII RepID=G7M1G3_9CLOT
spoIIAA; anti-sigma F factor antagonist
Anti-sigma F factor antagonist {ECO:0000256|RuleBase:RU003749}; Stage II sporulation protein {ECO:0000256|RuleBase:RU003749}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_033G1_scaffold_106_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13745..16033)
DNA (2289bp) protein (763aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XRD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AIY83588.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
hypothetical protein
L2_013_033G1_scaffold_106_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16206..16880)
DNA (675bp) protein (225aa)
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Deoxyribose-phosphate aldolase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FKY3_9CLOT
L2_013_033G1_scaffold_106_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16988..18034)
DNA (1047bp) protein (349aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
DNA polymerase IV n=1 Tax=Clostridium colicanis 209318 RepID=N9WHB2_9CLOT
hypothetical protein
L2_013_033G1_scaffold_106_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18052..19020)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WGP2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82585.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_106_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19295..19708
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y363_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84301.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_106_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19743..20033)
DNA (291bp) protein (97aa)
stress responsive A/B Barrel domain protein
Stress responsive A/B Barrel domain protein {ECO:0000313|EMBL:AIY83549.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
stress responsive alpha-beta barrel domain-containing protein id=14425438 bin=bin1_lowGC species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin1_lowGC organism_group=Unknown_CP
L2_013_033G1_scaffold_106_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20108..22663)
DNA (2556bp) protein (852aa)
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:AIY84980.1}; EC=3.6.3.8 {ECO:0000313|EMBL:AIY84980.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
calcium-translocating P-type ATPase, PMCA-type (EC:3.6.3.8)
Calcium-translocating P-type ATPase, SERCA-type n=1 Tax=Clostridium colicanis 209318 RepID=N9XRE1_9CLOT
L2_013_033G1_scaffold_106_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22814..24454
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y265_9CLOT
Putative manganase-dependent inorganic pyrophosphatase {ECO:0000313|EMBL:AIY84296.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
putative manganase-dependent inorganic pyrophosphatase
L2_013_033G1_scaffold_106_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24495..24896)
DNA (402bp) protein (134aa)
chemotaxis protein CheW n=1 Tax=Clostridium botulinum RepID=UPI0002E064A5
cheW-like domain protein
CheW-like domain protein {ECO:0000313|EMBL:AIY83870.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_106_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24915..25289)
DNA (375bp) protein (125aa)
chemotaxis protein CheY n=1 Tax=Clostridium sp. JC122 RepID=UPI0002895EC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82694.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_106_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25283..25900)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WGT4_9CLOT
cheC-like family protein
Chemotaxis protein CheY {ECO:0000313|EMBL:KJU70761.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_033G1_scaffold_106_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25915..27870)
DNA (1956bp) protein (652aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y3A8_9CLOT
cheW-like domain protein
L2_013_033G1_scaffold_106_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27883..28650)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XRH8_9CLOT
cheR methyltransferase, all-alpha domain protein
CheR methyltransferase, all-alpha domain protein {ECO:0000313|EMBL:AIY82837.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_033G1_scaffold_106_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28700..29188)
DNA (489bp) protein (163aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Clostridium colicanis 209318 RepID=N9WHF7_9CLOT
cheD chemotactic sensory transduction family protein
L2_013_033G1_scaffold_106_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29179..29640)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WGT7_9CLOT
cheW-like domain protein
CheW-like domain protein {ECO:0000313|EMBL:AIY82558.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 138 in total

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