ggKbase home page

L2_013_033G1_scaffold_140

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_033G1_scaffold_140_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..1200)
DNA (1200bp) protein (400aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
DNA polymerase I n=1 Tax=Lactobacillus rhamnosus (strain Lc 705) RepID=C7TK46_LACRL
polA; DNA polymerase I
L2_013_033G1_scaffold_140_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1767..2477)
DNA (711bp) protein (237aa)
Integral membrane protein, interacts with FtsH n=8 Tax=Lactobacillus rhamnosus RepID=C7TK47_LACRL
inhibitor of apoptosis-promoting Bax1 family protein
Integral membrane protein, interacts with FtsH {ECO:0000313|EMBL:AGP74431.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_140_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3319..4374)
DNA (1056bp) protein (352aa)
Cell surface protein n=2 Tax=Lactobacillus rhamnosus RepID=C7TK48_LACRL
yqbJ; cell surface protein
Cell surface protein {ECO:0000313|EMBL:EKS52871.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_033G1_scaffold_140_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4389..4727)
DNA (339bp) protein (113aa)
Conserved protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TK49_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN80087.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_033G1_scaffold_140_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4761..5549)
DNA (789bp) protein (263aa)
Cell surface protein n=4 Tax=Lactobacillus rhamnosus RepID=G7V2E8_LACRH
cell surface protein
Cell surface protein {ECO:0000313|EMBL:AGP74434.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_140_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5581..9111)
DNA (3531bp) protein (1177aa)
Uncharacterized protein n=3 Tax=Lactobacillus rhamnosus RepID=S5A761_LACRH
Uncharacterized protein {ECO:0000313|EMBL:AGP74435.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Hypothetical protein
L2_013_033G1_scaffold_140_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9526..11031)
DNA (1506bp) protein (502aa)
HTH domain protein n=3 Tax=Lactobacillus rhamnosus RepID=G7V2F0_LACRH
HTH domain protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74436.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_140_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11372..12682)
DNA (1311bp) protein (437aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
UDP-N-acetylmuramate--L-alanine ligase n=5 Tax=Lactobacillus RepID=C8UV27_LACRG
UDP-N-acetylmuramate-alanine ligase
L2_013_033G1_scaffold_140_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12682..12879)
DNA (198bp) protein (66aa)
DNA segregation ATPase FtsK/SpoIIIE related protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QRE5_LACRH
ftsk gamma domain protein
Cell division protein FtsK {ECO:0000313|EMBL:EKS52877.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_033G1_scaffold_140_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12879..15098)
DNA (2220bp) protein (740aa)
Cell division protein, DNA segregation ATPase FtsK/SpoIIIE related protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TK55_LACRL
ftsK/SpoIIIE family protein
Cell division protein FtsK {ECO:0000313|EMBL:AGP74439.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_140_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15404..15655
DNA (252bp) protein (84aa)
Conserved protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TK56_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN80094.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_033G1_scaffold_140_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15766..16404)
DNA (639bp) protein (213aa)
tRNA binding domain protein n=14 Tax=Lactobacillus rhamnosus RepID=C7TK57_LACRL
pheT; tRNA binding domain-containing protein
Phenylalanyl-tRNA synthetase domain protein {ECO:0000313|EMBL:AGP74440.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_140_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16419..16736)
DNA (318bp) protein (106aa)
tRNA binding domain protein n=14 Tax=Lactobacillus rhamnosus RepID=C7TK57_LACRL
pheT; tRNA binding domain-containing protein
Thiol-disulfide isomerase and thioredoxin {ECO:0000313|EMBL:EKS52879.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_033G1_scaffold_140_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17019..17357
DNA (339bp) protein (113aa)
Conserved secreted protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TK58_LACRL
putative small secreted protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74442.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_140_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17427..18071)
DNA (645bp) protein (215aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
tRNA (guanine-N(7)-)-methyltransferase n=12 Tax=Lactobacillus rhamnosus RepID=B5QRE0_LACRH
trmB; tRNA (guanine-N(7)-)-methyltransferase
L2_013_033G1_scaffold_140_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18203..18976)
DNA (774bp) protein (258aa)
Choline kinase-like enzyme n=11 Tax=Lactobacillus rhamnosus RepID=B5QRD9_LACRH
phosphotransferase enzyme family protein
Aminoglycoside phosphotransferase family protein {ECO:0000313|EMBL:AGP74445.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_140_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19465..20679)
DNA (1215bp) protein (405aa)
Bacterial ABC transporter EcsB family protein n=4 Tax=Lactobacillus rhamnosus RepID=G7V2G2_LACRH
bacterial ABC transporter EcsB family protein
ABC transporter, permease protein EscB {ECO:0000313|EMBL:AGP74447.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_140_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20676..21407)
DNA (732bp) protein (244aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEN80102.1}; EC=3.6.3.25 {ECO:0000313|EMBL:EEN80102.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
ABC-type transporter ATP-binding protein EcsA n=3 Tax=Lactobacillus rhamnosus RepID=G7V2G3_LACRH
ABC transporter, ATP-binding protein EcsA
L2_013_033G1_scaffold_140_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21505..21933
DNA (429bp) protein (143aa)
HIT family protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TK65_LACRL
hit; HIT family protein
Histidine triad (HIT) nucleotide-binding protein {ECO:0000313|EMBL:AGP74449.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_140_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21936..22295
DNA (360bp) protein (120aa)
Conserved protein n=11 Tax=Lactobacillus rhamnosus RepID=C7TDI1_LACRG
ytxH-like family protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74450.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_140_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22443..23345
DNA (903bp) protein (301aa)
Foldase protein PrsA {ECO:0000256|HAMAP-Rule:MF_01145}; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_01145};; Flags: Precursor;; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Foldase protein PrsA n=11 Tax=Lactobacillus rhamnosus RepID=C7TDI2_LACRG
prsA; peptidylprolyl cis-trans isomerase PrsA1
L2_013_033G1_scaffold_140_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23820..24788)
DNA (969bp) protein (323aa)
CMP-binding factor n=3 Tax=Lactobacillus rhamnosus RepID=C7TK68_LACRL
OB-fold nucleic acid binding domain-containing protein
CMP-binding-factor 1 {ECO:0000313|EMBL:EKS52890.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_033G1_scaffold_140_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25102..25449)
DNA (348bp) protein (116aa)
UPF0342 protein LRH_01568 n=12 Tax=Lactobacillus rhamnosus RepID=B5QMJ1_LACRH
hypothetical protein
UPF0342 protein LOCK908_1817 {ECO:0000256|HAMAP-Rule:MF_01526}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_140_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25471..27513)
DNA (2043bp) protein (681aa)
Membrane carboxypeptidase n=10 Tax=Lactobacillus rhamnosus RepID=B5QMJ0_LACRH
Multimodular transpeptidase-transglycosylase {ECO:0000313|EMBL:AGP74454.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
penicillin-binding, 1A family protein
L2_013_033G1_scaffold_140_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27625..28461
DNA (837bp) protein (279aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Ribosomal large subunit 23S pseudouridine synthase D n=4 Tax=Lactobacillus rhamnosus RepID=C7TK72_LACRL
50S ribosomal pseudouridine synthase
L2_013_033G1_scaffold_140_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28589..29044)
DNA (456bp) protein (152aa)
Arginine repressor n=5 Tax=Lactobacillus rhamnosus RepID=C7TK73_LACRL
argR; arginine repressor 2
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_033G1_scaffold_140_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(29260..30942)
DNA (1683bp) protein (561aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Arginine--tRNA ligase n=4 Tax=Lactobacillus rhamnosus RepID=C7TK74_LACRL
argS; arginine--tRNA ligase
L2_013_033G1_scaffold_140_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31398..31784
DNA (387bp) protein (129aa)
Conserved protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TK75_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN80114.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_033G1_scaffold_140_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31797..31979
DNA (183bp) protein (61aa)
Conserved protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TK76_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74459.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_140_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32145..33086
DNA (942bp) protein (314aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Dihydroorotate dehydrogenase n=8 Tax=Lactobacillus rhamnosus RepID=B5QMI4_LACRH
dihydroorotate dehydrogenase
Displaying items 1-30 of 59 in total

View Taxonomy