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L2_013_033G1_scaffold_152

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_033G1_scaffold_152_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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46..1482
DNA (1437bp) protein (479aa)
Signal recognition particle protein n=9 Tax=Lactobacillus rhamnosus RepID=C7TJT0_LACRL
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_152_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


1578..1853
DNA (276bp) protein (92aa)
30S ribosomal protein S16 n=61 Tax=Lactobacillus RepID=RS16_LACC3
SSU ribosomal protein S16p
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_033G1_scaffold_152_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1866..2120
DNA (255bp) protein (85aa)
UPF0109 protein LRH_07311 n=9 Tax=Lactobacillus rhamnosus RepID=B5QJU1_LACRH
RNA binding protein YlqC
UPF0109 protein LOCK908_1679 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_152_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2188..2706
DNA (519bp) protein (173aa)
Ribosome maturation factor RimM n=12 Tax=Lactobacillus rhamnosus RepID=B5QJU0_LACRH
rimM; 16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_033G1_scaffold_152_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2696..3481
DNA (786bp) protein (262aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
tRNA (guanine-N(1)-)-methyltransferase n=5 Tax=Lactobacillus rhamnosus RepID=C7TJS6_LACRL
trmD; tRNA (guanine-N(1)-)-methyltransferase
L2_013_033G1_scaffold_152_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


3686..4033
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=13 Tax=Lactobacillus RepID=S4ZWJ8_LACRH
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_152_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4362..4538
DNA (177bp) protein (59aa)
Conserved protein n=12 Tax=Lactobacillus rhamnosus RepID=C7TD40_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74312.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_152_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4681..4926
DNA (246bp) protein (82aa)
UPF0291 protein LRH_07286 n=10 Tax=Lactobacillus rhamnosus RepID=B5QJT6_LACRH
Hypothetical protein
UPF0291 protein LOCK908_1674 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_152_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4963..5208
DNA (246bp) protein (82aa)
UPF0154 protein HMPREF0539_1695 n=2 Tax=Lactobacillus rhamnosus RepID=C2JXR0_LACRH
UPF0154 protein LaR308_00210 {ECO:0000256|HAMAP-Rule:MF_00363}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
hypothetical protein
L2_013_033G1_scaffold_152_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5399..7156
DNA (1758bp) protein (586aa)
ABC transporter, ATPase component n=10 Tax=Lactobacillus rhamnosus RepID=C7TJS1_LACRL
ABC transporter, ATP-binding and permease protein {ECO:0000313|EMBL:AGP74309.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
ABC transporter
L2_013_033G1_scaffold_152_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7146..8948
DNA (1803bp) protein (601aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEN80146.1}; EC=3.6.3.44 {ECO:0000313|EMBL:EEN80146.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
ABC transporter, multidrug/protein/lipid transporter ATP-binding and permease protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TJS0_LACRL
mdlB; multidrug/protein/lipid ABC transporter ATP-binding protein\permease
L2_013_033G1_scaffold_152_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9012..9794)
DNA (783bp) protein (261aa)
Predicted membrane protein n=9 Tax=Lactobacillus rhamnosus RepID=B5QJT2_LACRH
yejC; membrane protein
Acid-resistant locus arl7 {ECO:0000313|EMBL:EKS52745.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_033G1_scaffold_152_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9819..11213)
DNA (1395bp) protein (465aa)
Amino acid permease n=5 Tax=Lactobacillus rhamnosus RepID=C7TJR8_LACRL
yhdG; amino acid permease
Amino acid transporter {ECO:0000313|EMBL:AGP74307.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_152_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11271..11921)
DNA (651bp) protein (217aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:EKS52743.1}; EC=2.3.1.51 {ECO:0000313|EMBL:EKS52743.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase n=10 Tax=Lactobacillus rhamnosus RepID=C7TJR7_LACRL
acyltransferase family protein
L2_013_033G1_scaffold_152_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12134..12868
DNA (735bp) protein (245aa)
tRNA (Adenine37-N(6))-methyltransferase TrmN6 {ECO:0000313|EMBL:EKS52742.1}; EC=2.1.1.223 {ECO:0000313|EMBL:EKS52742.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Methyltransferase n=10 Tax=Lactobacillus rhamnosus RepID=C7TD32_LACRG
ribosomal RNA adenine dimethylase family protein
L2_013_033G1_scaffold_152_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12858..13139
DNA (282bp) protein (94aa)
URI-like endonuclease n=10 Tax=Lactobacillus rhamnosus RepID=B5QJS8_LACRH
yazA; GIY-YIG domain endonuclease
Endonuclease {ECO:0000313|EMBL:BAI42092.1}; GIY-YIG domain endonuclease {ECO:0000313|EMBL:CAR87524.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_033G1_scaffold_152_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


13279..14067
DNA (789bp) protein (263aa)
30S ribosomal protein S2 n=12 Tax=Lactobacillus rhamnosus RepID=B5QK81_LACRH
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_033G1_scaffold_152_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14152..15033
DNA (882bp) protein (294aa)
Elongation factor Ts n=12 Tax=Lactobacillus rhamnosus RepID=B5QK80_LACRH
tsf; elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_152_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15402..16121
DNA (720bp) protein (240aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Uridylate kinase n=5 Tax=Lactobacillus rhamnosus RepID=C7TJR2_LACRL
pyrH; UMP kinase
L2_013_033G1_scaffold_152_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16121..16678
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=5 Tax=Lactobacillus rhamnosus RepID=C7TJR1_LACRL
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_033G1_scaffold_152_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17053..17805
DNA (753bp) protein (251aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Isoprenyl transferase n=8 Tax=Lactobacillus rhamnosus RepID=C7TJQ9_LACRL
uppS; UDP pyrophosphate synthetase
L2_013_033G1_scaffold_152_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17841..18629
DNA (789bp) protein (263aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Phosphatidate cytidylyltransferase n=4 Tax=Lactobacillus rhamnosus RepID=C7TJQ8_LACRL
cytidylyltransferase family protein
L2_013_033G1_scaffold_152_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18646..19887
DNA (1242bp) protein (414aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Membrane-associated zinc metalloprotease n=8 Tax=Lactobacillus rhamnosus RepID=C7TJQ7_LACRL
rseP; RIP metalloprotease RseP
L2_013_033G1_scaffold_152_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


19911..21641
DNA (1731bp) protein (577aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Proline--tRNA ligase n=1 Tax=Lactobacillus rhamnosus LOCK908 RepID=S5A3X0_LACRH
Prolyl-tRNA synthetase
L2_013_033G1_scaffold_152_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21763..26097
DNA (4335bp) protein (1445aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
DNA polymerase III polC-type n=1 Tax=Lactobacillus rhamnosus LOCK908 RepID=S5A5H3_LACRH
DNA polymerase III alpha subunit
L2_013_033G1_scaffold_152_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26351..26830
DNA (480bp) protein (160aa)
Ribosome maturation factor RimP n=10 Tax=Lactobacillus rhamnosus RepID=B5QK72_LACRH
yhbC; hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_033G1_scaffold_152_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26847..28061
DNA (1215bp) protein (405aa)
Transcription elongation factor NusA n=2 Tax=Lactobacillus rhamnosus RepID=C7TJQ3_LACRL
nusA; transcription elongation factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_152_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28073..28366
DNA (294bp) protein (98aa)
Predicted nucleic-acid-binding protein implicated in transcription termination n=11 Tax=Lactobacillus rhamnosus RepID=B5QK70_LACRH
hypothetical protein
Nucleic-acid-binding protein implicated in transcription termination {ECO:0000313|EMBL:CAR87509.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI42078.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_033G1_scaffold_152_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28369..28668
DNA (300bp) protein (100aa)
Ribosomal protein HS6-type (S12/L30/L7a) n=10 Tax=Lactobacillus rhamnosus RepID=B5QK69_LACRH
ylxQ; 50S ribosomal protein L7A
Ribosomal protein L7Ae family protein {ECO:0000313|EMBL:AGP74289.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_152_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28689..31478
DNA (2790bp) protein (930aa)
Translation initiation factor IF-2 n=5 Tax=Lactobacillus rhamnosus RepID=C7TJQ0_LACRL
infB; translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Displaying items 1-30 of 50 in total

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