ggKbase home page

L2_013_033G1_scaffold_153

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_033G1_scaffold_153_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2..586)
DNA (585bp) protein (195aa)
UPI0003D60130 related cluster n=1 Tax=unknown RepID=UPI0003D60130
Uncharacterized protein {ECO:0000313|EMBL:ETI86112.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_013_033G1_scaffold_153_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(607..1044)
DNA (438bp) protein (146aa)
UPI0003D63D04 related cluster n=1 Tax=unknown RepID=UPI0003D63D04
Late competence protein ComEA {ECO:0000313|EMBL:ETI86111.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
comEA; competence protein
L2_013_033G1_scaffold_153_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1234..2472
DNA (1239bp) protein (413aa)
UPI0003D5F341 related cluster n=1 Tax=unknown RepID=UPI0003D5F341
Uncharacterized protein {ECO:0000313|EMBL:KGF12407.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
peptidase M29 aminopeptidase II
L2_013_033G1_scaffold_153_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2453..3355)
DNA (903bp) protein (301aa)
UPI0003D6993C related cluster n=1 Tax=unknown RepID=UPI0003D6993C
Transporter, drug/metabolite exporter {ECO:0000313|EMBL:ETI86108.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
EamA family protein
L2_013_033G1_scaffold_153_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3591..4841)
DNA (1251bp) protein (417aa)
UPI0003D5F051 related cluster n=1 Tax=unknown RepID=UPI0003D5F051
Aluminum resistance protein {ECO:0000313|EMBL:ETI86107.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
aluminum resistance protein
L2_013_033G1_scaffold_153_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4838..5047)
DNA (210bp) protein (70aa)
UPI0003D5921F related cluster n=1 Tax=unknown RepID=UPI0003D5921F
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hfq; RNA-binding protein Hfq
L2_013_033G1_scaffold_153_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5049..5978)
DNA (930bp) protein (310aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5E6EF related cluster n=1 Tax=unknown RepID=UPI0003D5E6EF
miaA; tRNA isopentenyltransferase
L2_013_033G1_scaffold_153_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5975..6760)
DNA (786bp) protein (262aa)
UPI0003D67D66 related cluster n=1 Tax=unknown RepID=UPI0003D67D66
Uncharacterized protein {ECO:0000313|EMBL:ETI86104.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_013_033G1_scaffold_153_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6760..8676)
DNA (1917bp) protein (639aa)
UPI0003D61320 related cluster n=1 Tax=unknown RepID=UPI0003D61320
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
DNA mismatch repair protein MutL
L2_013_033G1_scaffold_153_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8678..11251)
DNA (2574bp) protein (858aa)
UPI0003D5E520 related cluster n=1 Tax=unknown RepID=UPI0003D5E520
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
DNA mismatch repair protein mutS
L2_013_033G1_scaffold_153_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11253..12584)
DNA (1332bp) protein (444aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D62DB3 related cluster n=1 Tax=unknown RepID=UPI0003D62DB3
MiaB family RNA modification protein
L2_013_033G1_scaffold_153_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12614..13450)
DNA (837bp) protein (279aa)
UPI0003D5E33A related cluster n=1 Tax=unknown RepID=UPI0003D5E33A
Uncharacterized protein {ECO:0000313|EMBL:ETI86100.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_013_033G1_scaffold_153_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(13592..16012)
DNA (2421bp) protein (807aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D61B4C related cluster n=1 Tax=unknown RepID=UPI0003D61B4C
phenylalanyl-tRNA synthetase
L2_013_033G1_scaffold_153_14
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16024..17046)
DNA (1023bp) protein (341aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D6062A related cluster n=1 Tax=unknown RepID=UPI0003D6062A
phenylalanyl-tRNA synthetase, subunit alpha
L2_013_033G1_scaffold_153_15
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17324..18463)
DNA (1140bp) protein (380aa)
UPI0003D5C87D related cluster n=1 Tax=unknown RepID=UPI0003D5C87D
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KGF12418.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
acyl-CoA dehydrogenase
L2_013_033G1_scaffold_153_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18474..18905)
DNA (432bp) protein (144aa)
UPI0003D607FF related cluster n=1 Tax=unknown RepID=UPI0003D607FF
Uncharacterized protein {ECO:0000313|EMBL:ETI86096.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
uncharacterized domain 1
L2_013_033G1_scaffold_153_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18898..19338)
DNA (441bp) protein (147aa)
UPI0003D67B35 related cluster n=1 Tax=unknown RepID=UPI0003D67B35
Uncharacterized protein {ECO:0000313|EMBL:ETI86095.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_013_033G1_scaffold_153_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19351..20568)
DNA (1218bp) protein (406aa)
UPI0003D5FD95 related cluster n=1 Tax=unknown RepID=UPI0003D5FD95
Macrolide export ATP-binding/permease protein MacB {ECO:0000313|EMBL:ETI86094.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_013_033G1_scaffold_153_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20561..21259)
DNA (699bp) protein (233aa)
UPI0003D65141 related cluster n=1 Tax=unknown RepID=UPI0003D65141
ABC transporter related protein {ECO:0000313|EMBL:ETI86093.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ABC transporter
L2_013_033G1_scaffold_153_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21268..22365)
DNA (1098bp) protein (366aa)
UPI0003D608A1 related cluster n=1 Tax=unknown RepID=UPI0003D608A1
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ETI86092.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
RND family efflux transporter MFP subunit
L2_013_033G1_scaffold_153_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22526..23887
DNA (1362bp) protein (454aa)
UPI0003D68C54 related cluster n=1 Tax=unknown RepID=UPI0003D68C54
Multidrug resistance protein NorM {ECO:0000313|EMBL:ETI86091.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
norM; putative multidrug resistance protein NorM
L2_013_033G1_scaffold_153_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23899..24939)
DNA (1041bp) protein (347aa)
UPI0003D62A66 related cluster n=1 Tax=unknown RepID=UPI0003D62A66
Uncharacterized protein {ECO:0000313|EMBL:ETI86090.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
lipopolysaccharide heptosyltransferase I
L2_013_033G1_scaffold_153_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24930..25445)
DNA (516bp) protein (172aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
gmhB; histidinol-phosphate phosphatase (EC:3.1.3.-)
UPI0003D5EFEB related cluster n=1 Tax=unknown RepID=UPI0003D5EFEB
L2_013_033G1_scaffold_153_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25447..26910)
DNA (1464bp) protein (488aa)
UPI0003D65E28 related cluster n=1 Tax=unknown RepID=UPI0003D65E28
Bifunctional protein HldE {ECO:0000256|HAMAP-Rule:MF_01603, ECO:0000256|SAAS:SAAS00015122}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
rfaE bifunctional protein
L2_013_033G1_scaffold_153_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26894..27457)
DNA (564bp) protein (188aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D640E3 related cluster n=1 Tax=unknown RepID=UPI0003D640E3
phosphoheptose isomerase
L2_013_033G1_scaffold_153_26
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27457..28530)
DNA (1074bp) protein (358aa)
UPI0003D64925 related cluster n=1 Tax=unknown RepID=UPI0003D64925
Renal dipeptidase family protein {ECO:0000313|EMBL:ETI86086.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
peptidase M19
L2_013_033G1_scaffold_153_27
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28527..29012)
DNA (486bp) protein (162aa)
UPI0003D64620 related cluster n=1 Tax=unknown RepID=UPI0003D64620
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
transcriptional repressor NrdR
L2_013_033G1_scaffold_153_28
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(29131..31599)
DNA (2469bp) protein (823aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D665DE related cluster n=1 Tax=unknown RepID=UPI0003D665DE
leucyl-tRNA synthetase
L2_013_033G1_scaffold_153_29
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31720..32202)
DNA (483bp) protein (161aa)
UPI0003D5A5FD related cluster n=1 Tax=unknown RepID=UPI0003D5A5FD
Uncharacterized protein {ECO:0000313|EMBL:ETI86083.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_013_033G1_scaffold_153_30
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32216..32701)
DNA (486bp) protein (162aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5DCD0 related cluster n=1 Tax=unknown RepID=UPI0003D5DCD0
phosphopantetheine adenylyltransferase
Displaying items 1-30 of 55 in total

View Taxonomy