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L2_013_033G1_scaffold_157

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_033G1_scaffold_157_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3..1637
DNA (1635bp) protein (545aa)
UPI0003D60130 related cluster n=1 Tax=unknown RepID=UPI0003D60130
Uncharacterized protein {ECO:0000313|EMBL:ETI86112.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
DNA internalization-related competence protein ComEC/Rec2
L2_013_033G1_scaffold_157_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1600..2559
DNA (960bp) protein (320aa)
holA; putative DNA polymerase III subunit delta (EC:2.7.7.7)
UPI0003D5FCD7 related cluster n=1 Tax=unknown RepID=UPI0003D5FCD7
Uncharacterized protein {ECO:0000313|EMBL:ETI86113.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_013_033G1_scaffold_157_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2556..3974
DNA (1419bp) protein (473aa)
UPI0003D6563B related cluster n=1 Tax=unknown RepID=UPI0003D6563B
VanW-like protein {ECO:0000313|EMBL:ETI86114.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
VanW family protein
L2_013_033G1_scaffold_157_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3992..7573
DNA (3582bp) protein (1194aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5B169 related cluster n=1 Tax=unknown RepID=UPI0003D5B169
DNA polymerase III
L2_013_033G1_scaffold_157_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


7718..8488
DNA (771bp) protein (257aa)
UPI0003D63338 related cluster n=1 Tax=unknown RepID=UPI0003D63338
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
30S ribosomal protein S2
L2_013_033G1_scaffold_157_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8522..9169
DNA (648bp) protein (216aa)
UPI0003D668AA related cluster n=1 Tax=unknown RepID=UPI0003D668AA
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
elongation factor Ts
L2_013_033G1_scaffold_157_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9222..9953
DNA (732bp) protein (244aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
pyrH; uridylate kinase (EC:2.7.4.22)
UPI0003D591E9 related cluster n=1 Tax=unknown RepID=UPI0003D591E9
L2_013_033G1_scaffold_157_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9946..10503
DNA (558bp) protein (186aa)
UPI0003D6679A related cluster n=1 Tax=unknown RepID=UPI0003D6679A
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ribosome recycling factor
L2_013_033G1_scaffold_157_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10500..10763
DNA (264bp) protein (88aa)
UPI0003D696C5 related cluster n=1 Tax=unknown RepID=UPI0003D696C5
Uncharacterized protein {ECO:0000313|EMBL:ETI86120.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_013_033G1_scaffold_157_10
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10747..11466
DNA (720bp) protein (240aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D65D04 related cluster n=1 Tax=unknown RepID=UPI0003D65D04
di-trans
L2_013_033G1_scaffold_157_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11469..12284
DNA (816bp) protein (272aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D60AB4 related cluster n=1 Tax=unknown RepID=UPI0003D60AB4
phosphatidate cytidylyltransferase
L2_013_033G1_scaffold_157_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12281..13438
DNA (1158bp) protein (386aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
UPI0003D5AED7 related cluster n=1 Tax=unknown RepID=UPI0003D5AED7
L2_013_033G1_scaffold_157_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13451..14488
DNA (1038bp) protein (346aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5B4F9 related cluster n=1 Tax=unknown RepID=UPI0003D5B4F9
RIP metalloprotease RseP
L2_013_033G1_scaffold_157_14
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14503..15576
DNA (1074bp) protein (358aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D5A67C related cluster n=1 Tax=unknown RepID=UPI0003D5A67C
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L2_013_033G1_scaffold_157_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


15573..17288
DNA (1716bp) protein (572aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
proS; putative prolyl-tRNA synthetase (EC:6.1.1.15)
UPI0003D62869 related cluster n=1 Tax=unknown RepID=UPI0003D62869
L2_013_033G1_scaffold_157_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17393..19774
DNA (2382bp) protein (794aa)
UPI0003D65E0B related cluster n=1 Tax=unknown RepID=UPI0003D65E0B
Peptidase, U32 family {ECO:0000313|EMBL:ETI86127.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
peptidase U32
L2_013_033G1_scaffold_157_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19774..22125
DNA (2352bp) protein (784aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D62233 related cluster n=1 Tax=unknown RepID=UPI0003D62233
MutS2 family protein
L2_013_033G1_scaffold_157_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22122..23075
DNA (954bp) protein (318aa)
UPI0003D62C38 related cluster n=1 Tax=unknown RepID=UPI0003D62C38
Esterase/lipase {ECO:0000313|EMBL:ETI86129.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hydrolase
L2_013_033G1_scaffold_157_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23086..23424
DNA (339bp) protein (113aa)
UPI0003D68708 related cluster n=1 Tax=unknown RepID=UPI0003D68708
Uncharacterized protein {ECO:0000313|EMBL:ETI86130.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_013_033G1_scaffold_157_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23515..24375
DNA (861bp) protein (287aa)
UPI0003D5DA6A related cluster n=1 Tax=unknown RepID=UPI0003D5DA6A
DegV family protein {ECO:0000313|EMBL:ETI86131.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
degV family protein
L2_013_033G1_scaffold_157_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24368..25972
DNA (1605bp) protein (535aa)
UPI0003D610AD related cluster n=1 Tax=unknown RepID=UPI0003D610AD
DAK2 protein {ECO:0000313|EMBL:ETI86132.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
DAK2 domain fusion protein YloV
L2_013_033G1_scaffold_157_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26015..26503)
DNA (489bp) protein (163aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D680E2 related cluster n=1 Tax=unknown RepID=UPI0003D680E2
hypothetical protein
L2_013_033G1_scaffold_157_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26636..27064
DNA (429bp) protein (143aa)
UPI0003D67784 related cluster n=1 Tax=unknown RepID=UPI0003D67784
Uncharacterized protein {ECO:0000313|EMBL:ETI86134.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
CtsR family transcriptional regulator
L2_013_033G1_scaffold_157_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27079..27609
DNA (531bp) protein (177aa)
UPI0003D65F6A related cluster n=1 Tax=unknown RepID=UPI0003D65F6A
UvrB/UvrC protein {ECO:0000313|EMBL:ETI86135.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UvrB/UvrC protein
L2_013_033G1_scaffold_157_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27606..28679
DNA (1074bp) protein (358aa)
Protein-arginine kinase {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166216}; EC=2.7.14.1 {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166206};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D62787 related cluster n=1 Tax=unknown RepID=UPI0003D62787
ATP:guanido phosphotransferase
L2_013_033G1_scaffold_157_26
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28686..31169
DNA (2484bp) protein (828aa)
UPI0003D60FC3 related cluster n=1 Tax=unknown RepID=UPI0003D60FC3
Negative regulator of genetic competence ClpC/MecB {ECO:0000313|EMBL:ETI86137.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ATPase AAA
L2_013_033G1_scaffold_157_27
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31258..32622
DNA (1365bp) protein (455aa)
UPI0003D5FEA2 related cluster n=1 Tax=unknown RepID=UPI0003D5FEA2
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
DNA repair protein RadA
L2_013_033G1_scaffold_157_28
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32680..33801
DNA (1122bp) protein (374aa)
UPI0003D657FD related cluster n=1 Tax=unknown RepID=UPI0003D657FD
PIN/TRAM protein {ECO:0000313|EMBL:ETI86139.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Nucleotide binding protein PINc
L2_013_033G1_scaffold_157_29
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

33798..34967
DNA (1170bp) protein (390aa)
UPI0003D5CE5C related cluster n=1 Tax=unknown RepID=UPI0003D5CE5C
Bifunctional enzyme IspD/IspF {ECO:0000256|SAAS:SAAS00096235}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
2C-methyl-D-erythritol 2
L2_013_033G1_scaffold_157_30
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

34964..36412
DNA (1449bp) protein (483aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5E43B related cluster n=1 Tax=unknown RepID=UPI0003D5E43B
glutamyl-tRNA synthetase
Displaying items 1-30 of 53 in total

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