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L2_013_033G1_scaffold_230

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_033G1_scaffold_230_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..365
DNA (363bp) protein (121aa)
ISCpe7, transposase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BR26_CLOPF
ISCpe7, transposase {ECO:0000313|EMBL:EDT15836.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ISCpe7, transposase
L2_013_033G1_scaffold_230_2
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(362..937)
DNA (576bp) protein (192aa)
Transporter n=1 Tax=Clostridium colicanis 209318 RepID=N9WJF2_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
sodium/proline symporter
L2_013_033G1_scaffold_230_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2236..2493
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BYI7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13238.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_033G1_scaffold_230_4
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3533..3766)
DNA (234bp) protein (78aa)
Putative site-specific recombinase, resolvase family n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R3Z5_CLOPF
Recombinase {ECO:0000313|EMBL:CEQ29816.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L2_013_033G1_scaffold_230_5
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3763..3966)
DNA (204bp) protein (68aa)
Putative site-specific recombinase, resolvase family n=1 Tax=Clostridium difficile T15 RepID=U3XC87_CLODI
Recombinase {ECO:0000313|EMBL:CEP83411.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L2_013_033G1_scaffold_230_6
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4345..4575)
DNA (231bp) protein (77aa)
Putative site-specific recombinase, resolvase family n=1 Tax=Clostridium difficile T15 RepID=U3XC87_CLODI
Recombinase {ECO:0000313|EMBL:CEP83411.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L2_013_033G1_scaffold_230_7
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4743..5000)
DNA (258bp) protein (86aa)
Putative site-specific recombinase, resolvase family n=1 Tax=Clostridium difficile T15 RepID=U3XC87_CLODI
Recombinase {ECO:0000313|EMBL:CEQ29816.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L2_013_033G1_scaffold_230_8
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6084..6338)
DNA (255bp) protein (85aa)
Sigma-70, region 4 family n=1 Tax=Clostridium difficile T15 RepID=U3XBB7_CLODI
RNA polymerase sigma factor Tn1549-like {ECO:0000313|EMBL:CEQ29813.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
RNA polymerase sigma-70 factor, region 4
L2_013_033G1_scaffold_230_9
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6653..8374)
DNA (1722bp) protein (574aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium difficile E25 RepID=U3X207_CLODI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM94959.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
L2_013_033G1_scaffold_230_10
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8358..10115)
DNA (1758bp) protein (586aa)
ABC transporter family protein n=10 Tax=Clostridium difficile RepID=T2XUH8_CLODI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM94958.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
putative ABC transporter
L2_013_033G1_scaffold_230_11
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10285..11304
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Clostridium difficile E25 RepID=U3X5I9_CLODI
AraC family transcriptional regulator {ECO:0000313|EMBL:KGM94957.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
AraC family transcriptional regulator
L2_013_033G1_scaffold_230_12
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11602..13059)
DNA (1458bp) protein (486aa)
Putative ABC transporter ATP-binding protein TDE_0282 n=1 Tax=Clostridium difficile E25 RepID=U3X1S5_CLODI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM94956.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
ABC transporter
L2_013_033G1_scaffold_230_13
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13068..13778)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium difficile E25 RepID=U3X2B2_CLODI
Cobalt transporter {ECO:0000313|EMBL:KGM94955.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
Cobalt transport protein.
L2_013_033G1_scaffold_230_14
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13778..14374)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Clostridium difficile E25 RepID=U3X202_CLODI
Membrane protein {ECO:0000313|EMBL:KGM94954.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
hypothetical protein
L2_013_033G1_scaffold_230_15
Anaerococcus tetradius, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14406..15485)
DNA (1080bp) protein (360aa)
Thiazolinyl imide reductase n=1 Tax=Clostridium difficile E25 RepID=U3X2R1_CLODI
Thiazolinyl imide reductase {ECO:0000313|EMBL:EEI82723.1}; TaxID=525255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus tetradius ATCC 35098.;"
thiazolinyl imide reductase
L2_013_033G1_scaffold_230_16
Anaerococcus tetradius, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15482..16600)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Clostridium difficile E25 RepID=U3X5I4_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EEI82724.1}; TaxID=525255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus tetradius ATCC 35098.;"
saccharopine dehydrogenase
L2_013_033G1_scaffold_230_17
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16603..22074)
DNA (5472bp) protein (1824aa)
Amino acid adenylation domain protein n=1 Tax=Clostridium difficile E25 RepID=U3X1R9_CLODI
Amino acid adenylation domain-containing protein {ECO:0000313|EMBL:EHO84745.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
amino acid adenylation domain-containing protein
L2_013_033G1_scaffold_230_18
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22087..28314)
DNA (6228bp) protein (2076aa)
Predicted nonribosomal peptide synthetase n=1 Tax=Clostridium difficile E25 RepID=U3X2A8_CLODI
hypothetical protein
Predicted nonribosomal peptide synthetase {ECO:0000313|EMBL:EDK33547.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
L2_013_033G1_scaffold_230_19
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28334..29926)
DNA (1593bp) protein (531aa)
aryl acid activating protein (EC:2.7.7.-)
2,3-dihydroxybenzoate-AMP ligase n=1 Tax=Clostridium difficile E25 RepID=U3X1Z6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:BAH06449.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 12016).;"
L2_013_033G1_scaffold_230_20
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29939..30604)
DNA (666bp) protein (222aa)
phosphotransferase (EC:2.7.8.-)
Uncharacterized protein n=1 Tax=Clostridium difficile E25 RepID=U3X2Q6_CLODI
4'-phosphopantetheinyl transferase family protein {ECO:0000313|EMBL:EEU13297.1}; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus vaginalis ATCC 51170.;"
L2_013_033G1_scaffold_230_21
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30605..31345)
DNA (741bp) protein (247aa)
Predicted thioesterase n=1 Tax=Clostridium difficile E25 RepID=U3X5H9_CLODI
Thioesterase domain protein {ECO:0000313|EMBL:EID19889.1}; TaxID=1095729 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus anginosus subsp. whileyi CCUG 39159.;"
hypothetical protein
L2_013_033G1_scaffold_230_22
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31360..32337)
DNA (978bp) protein (326aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=11 Tax=Clostridium difficile RepID=T2XTS6_CLODI
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:ERJ85321.1}; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium oral taxon 113 str. W5053.;"
carboxysome formation protein
L2_013_033G1_scaffold_230_23
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32377..33738)
DNA (1362bp) protein (454aa)
mbtI: isochorismate synthase/isochorismate-pyruvate lyase MbtI (EC:4.1.3.- 5.4.4.2)
Putative isochorismate synthase n=1 Tax=Clostridium difficile E25 RepID=U3X2A3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGM94952.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
L2_013_033G1_scaffold_230_24
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33984..34367)
DNA (384bp) protein (128aa)
Iron dependent repressor, N-terminal DNA binding domain protein n=11 Tax=Clostridium difficile RepID=T2XW18_CLODI
Transcriptional regulator {ECO:0000313|EMBL:KGM94951.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
transcriptional regulator
L2_013_033G1_scaffold_230_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34890..35162)
DNA (273bp) protein (91aa)
cysE; serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Serine acetyltransferase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V854_CLOPF
Displaying 25 items

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