ggKbase home page

L2_013_033G1_scaffold_269

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_033G1_scaffold_269_1
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1273)
DNA (1272bp) protein (424aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
rseP; Protease EcfE (RseP) (EC:3.4.24.-)
RIP metalloprotease RseP n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LLN3_9PAST
L2_013_033G1_scaffold_269_2
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1283..2149)
DNA (867bp) protein (289aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
Phosphatidate cytidylyltransferase n=2 Tax=Haemophilus haemolyticus RepID=F9GU25_HAEHA
phosphatidate cytidylyltransferase
L2_013_033G1_scaffold_269_3
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2171..2890)
DNA (720bp) protein (240aa)
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.31 {ECO:0000256|HAMAP-Rule:MF_01139};; Ditrans,polycis-undecaprenylcistransferase {ECO:0000256|HAMAP-Rule:MF_01139}; Undecaprenyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; Undecaprenyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GU26_HAEHA
undecaprenyl pyrophosphate synthase
L2_013_033G1_scaffold_269_4
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3043..3330
DNA (288bp) protein (96aa)
UPF0235 protein GG9_0725 n=2 Tax=Haemophilus haemolyticus RepID=F9GP75_HAEHA
UPF0235 protein GG9_0725 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
hypothetical protein
L2_013_033G1_scaffold_269_5
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3459..6044
DNA (2586bp) protein (862aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
Leucine--tRNA ligase n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DQL7_HAEHA
leucyl-tRNA synthetase
L2_013_033G1_scaffold_269_6
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6140..6643
DNA (504bp) protein (168aa)
LPS-assembly lipoprotein RlpB n=1 Tax=Haemophilus haemolyticus M19107 RepID=F9GIY4_HAEHA
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186, ECO:0000256|SAAS:SAAS00074334}; Flags: Precursor;; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
rlpB; RlpB protein
L2_013_033G1_scaffold_269_7
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6643..7677
DNA (1035bp) protein (345aa)
DNA polymerase III delta subunit (EC:2.7.7.7)
DNA polymerase III subunit delta n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GU30_HAEHA
DNA polymerase III subunit delta {ECO:0000313|EMBL:EGT76917.1}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
L2_013_033G1_scaffold_269_8
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7764..8030
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Haemophilus RepID=H1LLM6_9PAST
Uncharacterized protein {ECO:0000313|EMBL:EGT76002.1}; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
hypothetical protein
L2_013_033G1_scaffold_269_9
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8079..8492)
DNA (414bp) protein (138aa)
Mutator mutT protein n=3 Tax=Haemophilus RepID=F9GIY1_HAEHA
Mutator mutT protein {ECO:0000313|EMBL:EGT76001.1}; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
mutator protein MutT
L2_013_033G1_scaffold_269_10
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8557..11262)
DNA (2706bp) protein (902aa)
Protein translocase subunit SecA n=1 Tax=Haemophilus haemolyticus M21639 RepID=F9H3I6_HAEHA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21639.;"
secA; preprotein translocase subunit SecA
L2_013_033G1_scaffold_269_11
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11387..11689)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9GZ27_HAEHA
Uncharacterized protein {ECO:0000313|EMBL:EGT80453.1}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
hypothetical protein
L2_013_033G1_scaffold_269_12
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11768..12097
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Haemophilus haemolyticus M19107 RepID=F9GIX8_HAEHA
Uncharacterized protein {ECO:0000313|EMBL:EGT80452.1}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
hypothetical protein
L2_013_033G1_scaffold_269_13
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12087..12941)
DNA (855bp) protein (285aa)
Methyl-directed repair DNA adenine methylase (EC:2.1.1.72)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
DNA adenine methylase n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DQH8_HAEHA
L2_013_033G1_scaffold_269_14
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12943..14031)
DNA (1089bp) protein (363aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GTD5_HAEHA
L2_013_033G1_scaffold_269_15
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14052..14594)
DNA (543bp) protein (181aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=4 Tax=Haemophilus RepID=F9GHQ3_HAEHA
L2_013_033G1_scaffold_269_16
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14806..15549)
DNA (744bp) protein (248aa)
rlmB; 23S rRNA mG2251 methyltransferase (EC:2.1.1.-)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=866630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae F3031.;"
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Haemophilus influenzae (strain R2846 / 12) RepID=E3GS28_HAEI2
L2_013_033G1_scaffold_269_17
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15605..17953)
DNA (2349bp) protein (783aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=866630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae F3031.;"
Ribonuclease R n=2 Tax=Haemophilus influenzae RepID=E7A638_HAEIF
exoribonuclease r, rnase r
L2_013_033G1_scaffold_269_18
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18057..19115)
DNA (1059bp) protein (353aa)
Putative uncharacterized protein n=1 Tax=Haemophilus haemolyticus M19501 RepID=F9GQ63_HAEHA
Uncharacterized protein {ECO:0000313|EMBL:EGT74858.1}; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
hypothetical protein
L2_013_033G1_scaffold_269_19
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19248..21233
DNA (1986bp) protein (662aa)
Glutathionylspermidine synthetase/amidase n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LQY1_9PAST
Glutathionylspermidine synthetase/amidase {ECO:0000313|EMBL:EHO45852.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase
L2_013_033G1_scaffold_269_20
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21441..25958
DNA (4518bp) protein (1506aa)
hap2; adhesion and penetration protein autotransporter Hap (EC:3.4.21.-)
IgA-specific serine endopeptidase n=1 Tax=Haemophilus haemolyticus M21639 RepID=F9H2N0_HAEHA
IgA-specific serine endopeptidase {ECO:0000313|EMBL:EGT83263.1}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21639.;"
L2_013_033G1_scaffold_269_21
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26068..27255)
DNA (1188bp) protein (396aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21639.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Haemophilus haemolyticus M21639 RepID=F9H7M4_HAEHA
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L2_013_033G1_scaffold_269_22
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27365..27733)
DNA (369bp) protein (123aa)
Ribosome-recycling factor n=9 Tax=Haemophilus RepID=RRF_HAEIG
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
Displaying 22 items

View Taxonomy