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L2_013_033G1_scaffold_283

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_033G1_scaffold_283_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1..396
DNA (396bp) protein (132aa)
ABC-type oligopeptide transport system, periplasmic component n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QL38_LACRH
bacterial extracellular solute-binding s, 5 Middle family protein
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA {ECO:0000313|EMBL:AGP73915.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_283_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(452..1264)
DNA (813bp) protein (271aa)
Histidinol phosphatase related hydrolase of the PHP family n=5 Tax=Lactobacillus rhamnosus RepID=C7TIP6_LACRL
PHP domain-containing protein
Histidinol phosphatase {ECO:0000313|EMBL:KIC97334.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_033G1_scaffold_283_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1526..2254)
DNA (729bp) protein (243aa)
Deoxyadenosine kinase / Deoxyguanosine kinase {ECO:0000313|EMBL:EKS51326.1}; EC=2.7.1.113 {ECO:0000313|EMBL:EKS51326.1};; EC=2.7.1.76 {ECO:0000313|EMBL:EKS51326.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Deoxynucleoside kinase n=8 Tax=Lactobacillus rhamnosus RepID=C7TIP5_LACRL
deoxynucleoside kinase family protein
L2_013_033G1_scaffold_283_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2330..3061)
DNA (732bp) protein (244aa)
Nicotinamide mononucleotide transporter n=5 Tax=Lactobacillus rhamnosus RepID=C7TBX3_LACRG
nicotinamide mononucleotide transporter
Membrane protein {ECO:0000313|EMBL:KIC97336.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_033G1_scaffold_283_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3288..4223)
DNA (936bp) protein (312aa)
Short-chain alcohol dehydrogenase n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TBX2_LACRG
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEN80564.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
short-chain alcohol dehydrogenase
L2_013_033G1_scaffold_283_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4245..5081)
DNA (837bp) protein (279aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Peptide methionine sulfoxide reductase MsrA n=5 Tax=Lactobacillus rhamnosus RepID=S5A4H1_LACRH
msrA; peptide-methionine (S)-S-oxide reductase
L2_013_033G1_scaffold_283_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5265..5957)
DNA (693bp) protein (231aa)
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EEN80562.1}; EC=5.4.2.- {ECO:0000313|EMBL:EEN80562.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Phosphoglycerate mutase family protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TIP1_LACRL
histidine phosphatase super family protein
L2_013_033G1_scaffold_283_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6051..6920)
DNA (870bp) protein (290aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EEN80561.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EEN80561.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L-serine deaminase n=5 Tax=Lactobacillus rhamnosus RepID=B5QL45_LACRH
sdhA; L-serine dehydratase, iron-sulfur-dependent, subunit alpha
L2_013_033G1_scaffold_283_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6968..7633)
DNA (666bp) protein (222aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=8 Tax=Lactobacillus rhamnosus RepID=C7TIN9_LACRL
L-serine dehydratase, beta subunit
L-serine dehydratase, beta subunit {ECO:0000313|EMBL:AGP73907.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_283_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7799..8407)
DNA (609bp) protein (203aa)
UPF0637 protein LC705_01233 n=4 Tax=Lactobacillus rhamnosus RepID=C7TIN8_LACRL
hypothetical protein
UPF0637 protein LOCK908_1267 {ECO:0000256|HAMAP-Rule:MF_01851}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_283_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8572..8994
DNA (423bp) protein (141aa)
Conserved protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TIN7_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73905.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_283_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9176..11137)
DNA (1962bp) protein (654aa)
Glutathione biosynthesis bifunctional protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TIN6_LACRL
gshAB; amino acid ligase
Putative glutamate--cysteine ligase/gamma-glutamylcysteine synthetase {ECO:0000313|EMBL:EEN80557.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_033G1_scaffold_283_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11385..12773
DNA (1389bp) protein (463aa)
ATPase n=3 Tax=Lactobacillus RepID=S5A468_LACRH
ATPase
Recombination factor protein RarA {ECO:0000313|EMBL:EEN80556.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_033G1_scaffold_283_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13517..13795
DNA (279bp) protein (93aa)
Conserved protein n=8 Tax=Lactobacillus rhamnosus RepID=C7TBW1_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS51314.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_033G1_scaffold_283_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13856..14356
DNA (501bp) protein (167aa)
Universal stress protein n=12 Tax=Lactobacillus rhamnosus RepID=B5QL53_LACRH
universal stress family protein
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_283_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14548..15435)
DNA (888bp) protein (296aa)
Transcriptional regulator n=6 Tax=Lactobacillus rhamnosus RepID=C7TBV9_LACRG
helix-turn-helix family protein
Transcriptional regulator, xre family {ECO:0000313|EMBL:EKS51312.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_033G1_scaffold_283_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16099..17067)
DNA (969bp) protein (323aa)
Conserved protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TIN0_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73896.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_283_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17128..17508)
DNA (381bp) protein (127aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TIM9_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC97349.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_033G1_scaffold_283_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17843..18025)
DNA (183bp) protein (61aa)
Conserved protein n=12 Tax=Lactobacillus rhamnosus RepID=C7TBV6_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS51309.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_033G1_scaffold_283_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18267..19703)
DNA (1437bp) protein (479aa)
Fe-S assembly protein SufB, SUF system n=9 Tax=Lactobacillus rhamnosus RepID=C7TIM7_LACRL
sufB; feS assembly protein SufB
Fe-S assembly protein SufB {ECO:0000313|EMBL:EGF35128.1}; TaxID=947828 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus MTCC 5462.;"
L2_013_033G1_scaffold_283_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19696..20142)
DNA (447bp) protein (149aa)
Fe-S cluster formation protein, NifU-like protein n=8 Tax=Lactobacillus rhamnosus RepID=B5QL60_LACRH
sufA_nifU; Fe-S assembly protein SufA
Putative iron-sulfur cluster assembly scaffold protein for SUF system SufE2 {ECO:0000313|EMBL:EKS51307.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_033G1_scaffold_283_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20129..21325)
DNA (1197bp) protein (399aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Cysteine desulfurase n=4 Tax=Lactobacillus rhamnosus RepID=C7TIM5_LACRL
sufS; cysteine desulfurase
L2_013_033G1_scaffold_283_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21318..22349)
DNA (1032bp) protein (344aa)
ABC transporter, Fe-S cluster assembly transporter permease component n=5 Tax=Lactobacillus rhamnosus RepID=C7TIM4_LACRL
sufD; Fe-S cluster assembly ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KIC97354.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_033G1_scaffold_283_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22342..23109)
DNA (768bp) protein (256aa)
Fe-S cluster assembly ABC-type transport system, ATPase component n=11 Tax=Lactobacillus rhamnosus RepID=B5QL63_LACRH
sufC; feS assembly ATPase SufC
Iron-sulfur cluster assembly ATPase protein SufC {ECO:0000313|EMBL:EKS51304.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_033G1_scaffold_283_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23290..23979)
DNA (690bp) protein (230aa)
ABC-type metal ion transport system, permease component n=10 Tax=Lactobacillus rhamnosus RepID=B5QL64_LACRH
metal ion ABC transporter permease
Methionine ABC transporter permease {ECO:0000313|EMBL:KIC97356.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_033G1_scaffold_283_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23984..25036)
DNA (1053bp) protein (351aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
ABC transporter family protein n=5 Tax=Lactobacillus rhamnosus RepID=G7UYY2_LACRH
ABC transporter family protein
L2_013_033G1_scaffold_283_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25055..25885)
DNA (831bp) protein (277aa)
Lipoprotein n=4 Tax=Lactobacillus rhamnosus RepID=C7TIM0_LACRL
metQ; ABC transporter substrate-binding protein, NLPA lipoprotein
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Displaying 27 items

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