ggKbase home page

L2_013_033G1_scaffold_293

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_033G1_scaffold_293_1
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..196)
DNA (195bp) protein (65aa)
Nucleoside transporter, NupC family n=4 Tax=Haemophilus RepID=H1LNM1_9PAST
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
nupC; Nucleoside permease NupC
L2_013_033G1_scaffold_293_2
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(298..1086)
DNA (789bp) protein (263aa)
Radical SAM domain protein n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LNM0_9PAST
Radical SAM domain protein {ECO:0000313|EMBL:EHO47894.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
pyruvate-formate lyase-activating enzyme
L2_013_033G1_scaffold_293_3
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1095..2639)
DNA (1545bp) protein (515aa)
Glycine radical enzyme, YjjI family n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LNL9_9PAST
Glycine radical enzyme, YjjI family {ECO:0000313|EMBL:EHO47893.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
hypothetical protein
L2_013_033G1_scaffold_293_4
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2849..3517
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W3K9_HAEP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW14949.1}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
L2_013_033G1_scaffold_293_5
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3461..4501)
DNA (1041bp) protein (347aa)
Putative glycosyl transferase, family 9 n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GRT5_HAEHA
Putative glycosyl transferase, family 9 {ECO:0000313|EMBL:EGT78212.1}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
hypothetical protein
L2_013_033G1_scaffold_293_6
Aggregatibacter sp. oral taxon 458, Aggregatibacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4737..6092)
DNA (1356bp) protein (452aa)
Tetratricopeptide repeat protein n=1 Tax=Aggregatibacter sp. oral taxon 458 str. W10330 RepID=U1S783_9PAST
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ERH26517.1}; TaxID=1321772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter.;" source="Aggregatibacter sp. oral taxon 458 str. W10330.;"
hypothetical protein
L2_013_033G1_scaffold_293_7
Aggregatibacter sp. oral taxon 458, Aggregatibacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6147..6761)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Aggregatibacter sp. oral taxon 458 str. W10330 RepID=U1S3L1_9PAST
Uncharacterized protein {ECO:0000313|EMBL:ERH26518.1}; TaxID=1321772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter.;" source="Aggregatibacter sp. oral taxon 458 str. W10330.;"
hypothetical protein
L2_013_033G1_scaffold_293_8
Aggregatibacter sp. oral taxon 458, Aggregatibacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6899..7276
DNA (378bp) protein (126aa)
Toxin-antitoxin system, antitoxin component, Xre domain protein n=1 Tax=Aggregatibacter sp. oral taxon 458 str. W10330 RepID=U1QYG9_9PAST
Toxin-antitoxin system, antitoxin component, Xre domain protein {ECO:0000313|EMBL:ERH26519.1}; TaxID=1321772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter.;" source="Aggregatibacter sp. oral taxon 458 str. W10330.;"
hypothetical protein
L2_013_033G1_scaffold_293_9
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7609..8688)
DNA (1080bp) protein (360aa)
Fructose-bisphosphate aldolase n=2 Tax=Haemophilus RepID=F9GJ55_HAEHA
Fructose-bisphosphate aldolase, class II {ECO:0000313|EMBL:EHO47891.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
fructose-bisphosphate aldolase, class II
L2_013_033G1_scaffold_293_10
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8808..9968)
DNA (1161bp) protein (387aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
pgk; Phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GRT3_HAEHA
L2_013_033G1_scaffold_293_11
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10064..10846)
DNA (783bp) protein (261aa)
Ribonuclease, T2 family n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LNL5_9PAST
Ribonuclease, T2 family {ECO:0000313|EMBL:EHO47889.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
ribonuclease HI
L2_013_033G1_scaffold_293_12
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10924..11184
DNA (261bp) protein (87aa)
Ferredoxin n=6 Tax=Haemophilus RepID=A4NBG4_HAEI3
ferredoxin-like protein
Putative 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein {ECO:0000313|EMBL:EGT81437.1}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
L2_013_033G1_scaffold_293_13
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11271..12491)
DNA (1221bp) protein (407aa)
Aromatic amino acid transport protein n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DTC0_HAEHA
Aromatic amino acid transport protein {ECO:0000313|EMBL:EIJ74963.1}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
tyrosine-specific transport protein 2
L2_013_033G1_scaffold_293_14
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12528..13109)
DNA (582bp) protein (194aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=866630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae F3031.;"
Thymidine kinase n=2 Tax=Haemophilus influenzae RepID=E7A705_HAEIF
thymidine kinase/deoxyuridine kinase
L2_013_033G1_scaffold_293_15
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13118..14146)
DNA (1029bp) protein (343aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
gcp; Putative O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DTD4_HAEHA
L2_013_033G1_scaffold_293_16
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14378..14593
DNA (216bp) protein (72aa)
30S ribosomal protein S21 n=28 Tax=Haemophilus RepID=RS21_HAEI8
SSU ribosomal protein S21p
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae.;"
L2_013_033G1_scaffold_293_17
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14727..16508
DNA (1782bp) protein (594aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
DNA primase n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LNK9_9PAST
dnaG; DNA primase
L2_013_033G1_scaffold_293_18
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16580..18463
DNA (1884bp) protein (628aa)
RNA polymerase sigma factor RpoD n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9GXU7_HAEHA
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
DNA primase
L2_013_033G1_scaffold_293_19
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18587..18739)
DNA (153bp) protein (51aa)
IS200 family transposase n=1 Tax=Streptococcus pneumoniae BS455 RepID=E1H1K8_STREE
Transposase like protein {ECO:0000313|EMBL:EGT83256.1}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21639.;"
transposase IS200 like family protein
L2_013_033G1_scaffold_293_20
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19233..19619)
DNA (387bp) protein (129aa)
Large-conductance mechanosensitive channel n=5 Tax=Haemophilus RepID=C4F6W9_HAEIF
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21639.;"
large-conductance mechanosensitive channel
L2_013_033G1_scaffold_293_21
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19693..21069)
DNA (1377bp) protein (459aa)
Trk system potassium uptake protein trkA n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GRQ7_HAEHA
Trk system potassium uptake protein trkA {ECO:0000313|EMBL:EGT78258.1}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
trkA; TRK system potassium uptake protein
L2_013_033G1_scaffold_293_22
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21073..21876)
DNA (804bp) protein (268aa)
Putative transferase-like protein n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GRQ6_HAEHA
Putative transferase-like protein {ECO:0000313|EMBL:EGT78257.1}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
hypothetical protein
L2_013_033G1_scaffold_293_23
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21885..23237)
DNA (1353bp) protein (451aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LNI7_9PAST
sun; sun protein
L2_013_033G1_scaffold_293_24
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23237..24193)
DNA (957bp) protein (319aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
fmt; Methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DTD5_HAEHA
L2_013_033G1_scaffold_293_25
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24269..24778)
DNA (510bp) protein (170aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=2 Tax=Haemophilus RepID=H1LNI5_9PAST
Displaying 25 items

View Taxonomy