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L2_013_033G1_scaffold_403

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_033G1_scaffold_403_1
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1..1452)
DNA (1452bp) protein (484aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Ribonuclease Y n=4 Tax=Veillonella parvula RepID=T0T3U2_9FIRM
RNA binding metal dependent phosphohydrolase
L2_013_033G1_scaffold_403_2
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1544..1972)
DNA (429bp) protein (143aa)
Regulatory protein RecX n=2 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U6_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
regulatory protein RecX
L2_013_033G1_scaffold_403_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1990..3030)
DNA (1041bp) protein (347aa)
Protein RecA n=3 Tax=Veillonella RepID=T0UFD6_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
recA protein
L2_013_033G1_scaffold_403_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3035..4282)
DNA (1248bp) protein (416aa)
Putative competence-damage inducible protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U4_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
competence/damage-inducible protein CinA
L2_013_033G1_scaffold_403_5
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4320..5666)
DNA (1347bp) protein (449aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U3_9FIRM
MiaB-like tRNA modifying enzyme YliG
L2_013_033G1_scaffold_403_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5726..6763)
DNA (1038bp) protein (346aa)
ABC transporter, solute-binding protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U2_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EGL76452.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
extracellular solute-binding protein
L2_013_033G1_scaffold_403_7
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6820..8766)
DNA (1947bp) protein (649aa)
UPF0313 protein HMPREF0873_00587 n=2 Tax=Veillonella RepID=D6KIJ0_9FIRM
UPF0313 protein HMPREF0873_00587 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
radical SAM protein
L2_013_033G1_scaffold_403_8
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8806..9258)
DNA (453bp) protein (151aa)
Transcriptional regulator, nRE family n=4 Tax=Veillonella RepID=T0UFE1_9FIRM
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EFG23938.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
XRE family transcriptional regulator
L2_013_033G1_scaffold_403_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9307..12051)
DNA (2745bp) protein (915aa)
FtsK/SpoIIIE family protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YS27_9FIRM
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EFB85400.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
cell division protein FtsK
L2_013_033G1_scaffold_403_10
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12134..13435)
DNA (1302bp) protein (434aa)
UPI0003D5F339 related cluster n=1 Tax=unknown RepID=UPI0003D5F339
Recombination factor protein RarA {ECO:0000313|EMBL:ETI97117.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
ATPase AAA
L2_013_033G1_scaffold_403_11
unknown

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13642..13857
DNA (216bp) protein (72aa)

This feature has no annotations

L2_013_033G1_scaffold_403_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(13923..15719)
DNA (1797bp) protein (599aa)
Aspartate--tRNA ligase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BND0_VEIPT
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ACZ24887.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
aspartyl-tRNA synthetase
L2_013_033G1_scaffold_403_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(15665..16885)
DNA (1221bp) protein (407aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
Histidine--tRNA ligase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BND1_VEIPT
histidyl-tRNA synthetase
L2_013_033G1_scaffold_403_14
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16885..18312)
DNA (1428bp) protein (476aa)
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:EFB85404.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EFB85404.1};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Coproporphyrinogen dehydrogenase HemZ n=3 Tax=Veillonella parvula RepID=D1YS31_9FIRM
radical SAM protein
L2_013_033G1_scaffold_403_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18305..18793)
DNA (489bp) protein (163aa)
Transcriptional regulator, Fur family n=3 Tax=Veillonella RepID=D1YS32_9FIRM
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EFB85405.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Fur family ferric uptake regulator
L2_013_033G1_scaffold_403_16
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18835..19470)
DNA (636bp) protein (212aa)
Metallo-beta-lactamase domain protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YS33_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFB85406.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
beta-lactamase
L2_013_033G1_scaffold_403_17
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19470..21710)
DNA (2241bp) protein (747aa)
RelA/SpoT family protein n=2 Tax=Veillonella parvula ATCC 17745 RepID=D1YS34_9FIRM
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:ETI97124.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
(p)ppGpp synthetase I SpoT/RelA
L2_013_033G1_scaffold_403_18
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21722..23704)
DNA (1983bp) protein (661aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EFB85408.1}; EC=3.1.-.- {ECO:0000313|EMBL:EFB85408.1};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YS35_9FIRM
single-stranded-DNA-specific exonuclease RecJ
L2_013_033G1_scaffold_403_19
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23899..25317)
DNA (1419bp) protein (473aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YS36_9FIRM
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EFB85409.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
biotin and thiamin synthesis associated protein
L2_013_033G1_scaffold_403_20
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25628..26716)
DNA (1089bp) protein (363aa)
UPI0003D67820 related cluster n=2 Tax=unknown RepID=UPI0003D67820
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ETI97128.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L2_013_033G1_scaffold_403_21
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26718..27527)
DNA (810bp) protein (270aa)
ferrichrome transport ATP-binding protein fhuC (EC:3.6.3.34)
Putative ferrichrome ABC transporter, ATP-binding protein n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T453_9FIRM
Putative ferrichrome ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EQC65912.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
L2_013_033G1_scaffold_403_22
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27542..28540)
DNA (999bp) protein (333aa)
Ferrichrome transport system permease protein FhuG n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KNQ3_9FIRM
Ferrichrome transport system permease protein FhuG {ECO:0000313|EMBL:EFG25730.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
iron ABC transporter permease
L2_013_033G1_scaffold_403_23
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28542..29564)
DNA (1023bp) protein (341aa)
Iron(3+)-hydroxamate import system permease protein FhuB n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2S6_9FIRM
Iron(3+)-hydroxamate import system permease protein FhuB {ECO:0000313|EMBL:EGL76532.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
fecCD transport family protein
L2_013_033G1_scaffold_403_24
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29858..30622)
DNA (765bp) protein (255aa)
UPI0003D6463C related cluster n=2 Tax=unknown RepID=UPI0003D6463C
ABC transporter, permease protein {ECO:0000313|EMBL:ETI97132.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
membrane protein
L2_013_033G1_scaffold_403_25
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30619..31275)
DNA (657bp) protein (219aa)
YbbL ABC transporter ATP-binding protein n=2 Tax=Veillonella RepID=T0T3W2_9FIRM
YbbL ABC transporter ATP-binding protein {ECO:0000313|EMBL:EQC65916.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
ABC transporter ATP-binding protein
L2_013_033G1_scaffold_403_26
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31597..31872)
DNA (276bp) protein (92aa)
Uncharacterized protein n=3 Tax=Veillonella RepID=D1BND9_VEIPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETI97135.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L2_013_033G1_scaffold_403_27
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(31875..31958)
DNA (84bp) protein (28aa)
50S ribosomal protein L21 n=5 Tax=Veillonella RepID=E1L6U0_9FIRM
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
Displaying 27 items

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