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L2_013_033G1_scaffold_436

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_033G1_scaffold_436_1
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2..85
DNA (84bp) protein (28aa)
Transposase n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp22 RepID=S2NA03_LACPA
is53; transposase IS5 family protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ18939.1}; TaxID=1051661 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UW4.;"
L2_013_033G1_scaffold_436_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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140..1405
DNA (1266bp) protein (422aa)
Anaphase-promoting complex, cyclosome, subunit 3 family protein n=3 Tax=Lactobacillus rhamnosus RepID=G7UZX2_LACRH
anaphase-promoting complex, cyclosome, subunit 3 family protein
TPR-repeat-containing protein, putative component of Menaquinone-cytochrome C reductase {ECO:0000313|EMBL:AGP74085.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_436_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(1424..2302)
DNA (879bp) protein (293aa)
Conservedmembrane protein n=12 Tax=Lactobacillus rhamnosus RepID=C7TCE5_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS52490.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_033G1_scaffold_436_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2403..3599
DNA (1197bp) protein (399aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01263, ECO:0000256|SAAS:SAAS00014818}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01263, ECO:0000256|SAAS:SAAS00014831};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01263}; tRNA CCA-pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01263}; tRNA adenylyl-/cytidylyl- transferase {ECO:0000256|HAMAP-Rule:MF_01263}; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01263}; tRNA-NT {ECO:0000256|HAMAP-Rule:MF_01263}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
CCA-adding enzyme n=6 Tax=Lactobacillus rhamnosus RepID=C7TJ64_LACRL
poly A polymerase head domain protein
L2_013_033G1_scaffold_436_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3725..4180
DNA (456bp) protein (152aa)
Conserved protein n=7 Tax=Lactobacillus rhamnosus RepID=C7TCE7_LACRG
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR87290.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI41866.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_033G1_scaffold_436_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4329..6242
DNA (1914bp) protein (638aa)
ABC transporter, ATPase component n=2 Tax=Lactobacillus rhamnosus RepID=C7TJ66_LACRL
ATPase component of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:AGP74089.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
yfmR; ABC transporter ATPase
L2_013_033G1_scaffold_436_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6259..7209
DNA (951bp) protein (317aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Thymidylate synthase n=4 Tax=Lactobacillus RepID=TYSY_LACCA
Thymidylate synthase
L2_013_033G1_scaffold_436_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7326..7817
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Dihydrofolate reductase n=6 Tax=Lactobacillus RepID=DYR_LACCA
folA; dihydrofolate reductase
L2_013_033G1_scaffold_436_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7952..8593)
DNA (642bp) protein (214aa)
Channel, hemolysin III family protein n=4 Tax=Lactobacillus rhamnosus RepID=G7UZX9_LACRH
channel, hemolysin III family protein
Putative membrane protein hemolysin III-like protein {ECO:0000313|EMBL:AGP74092.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_436_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8835..9677
DNA (843bp) protein (281aa)
DegV family protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TJ71_LACRL
EDD, DegV family domain protein
EDD domain protein, DegV family {ECO:0000313|EMBL:EEN80467.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_033G1_scaffold_436_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9940..10785
DNA (846bp) protein (282aa)
Lysophospholipase L1 related esterase n=9 Tax=Lactobacillus rhamnosus RepID=B5QPC6_LACRH
putative lysophospholipase
GDSL-like protein {ECO:0000313|EMBL:EEN80468.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_033G1_scaffold_436_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10790..11431
DNA (642bp) protein (214aa)
Conserved protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TJ73_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74095.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_436_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11457..11975
DNA (519bp) protein (173aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Peptide methionine sulfoxide reductase MsrA n=4 Tax=Lactobacillus rhamnosus RepID=C7TJ74_LACRL
msrA; peptide methionine sulfoxide reductase
L2_013_033G1_scaffold_436_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11978..12220
DNA (243bp) protein (81aa)
UPF0346 protein LRH_03978 n=9 Tax=Lactobacillus rhamnosus RepID=B5QPC3_LACRH
hypothetical protein
UPF0346 protein LaR308_05095 {ECO:0000256|HAMAP-Rule:MF_01538}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_033G1_scaffold_436_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12189..13631
DNA (1443bp) protein (481aa)
Carboxyl-terminal protease n=3 Tax=Lactobacillus rhamnosus RepID=C7TJ76_LACRL
C-terminal processing peptidase family protein
Periplasmic protease {ECO:0000313|EMBL:AGP74098.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_436_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13890..14834
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus LOCK908 RepID=S5A3L5_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74099.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Displaying 16 items

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