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L2_013_033G1_scaffold_589

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_033G1_scaffold_589_1
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1..81
DNA (81bp) protein (27aa)
Transposase n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp22 RepID=S2NA03_LACPA
is53; transposase IS5 family protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ18939.1}; TaxID=1051661 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UW4.;"
L2_013_033G1_scaffold_589_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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146..670
DNA (525bp) protein (175aa)
ABC-2 type transporter n=1 Tax=Lactobacillus rhamnosus ATCC 21052 RepID=G6AKQ8_LACRH
ABC transporter
ABC-2 type transporter {ECO:0000313|EMBL:EKS50063.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_033G1_scaffold_589_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(946..1623)
DNA (678bp) protein (226aa)
Abortive infection protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TF75_LACRL
CAAX amino terminal protease self-immunity family protein
Membrane-bound protease, CAAX family {ECO:0000313|EMBL:AGP72709.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_589_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(2974..3168)
DNA (195bp) protein (65aa)
Conserved protein n=11 Tax=Lactobacillus rhamnosus RepID=C7TF73_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS50057.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_033G1_scaffold_589_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3208..4227)
DNA (1020bp) protein (340aa)
Cytochrome d ubiquinol oxidase subunit II n=4 Tax=Lactobacillus rhamnosus RepID=C7TF72_LACRL
cydB; cytochrome d ubiquinol oxidase subunit II
Cytochrome d ubiquinol oxidase subunit II {ECO:0000313|EMBL:AGP72706.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_589_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4220..5698)
DNA (1479bp) protein (493aa)
Bacterial Cytochrome Ubiquinol Oxidase family protein n=4 Tax=Lactobacillus rhamnosus RepID=G7V0R8_LACRH
bacterial Cytochrome Ubiquinol Oxidase family protein
Cytochrome d ubiquinol oxidase subunit I {ECO:0000313|EMBL:AGP72705.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_589_7
unknown

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comp(5847..5951)
DNA (105bp) protein (35aa)

This feature has no annotations

L2_013_033G1_scaffold_589_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6009..6515
DNA (507bp) protein (169aa)
4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme, amidase family protein n=11 Tax=Lactobacillus rhamnosus RepID=B5QN61_LACRH
yfkM; general stress protein 18
General stress protein {ECO:0000313|EMBL:KIC96952.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_033G1_scaffold_589_9
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(6808..7044)
DNA (237bp) protein (79aa)
30S ribosomal protein S18 n=70 Tax=Lactobacillus RepID=RS18_LACC3
50S ribosomal protein L18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
L2_013_033G1_scaffold_589_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7136..7726)
DNA (591bp) protein (197aa)
Single-stranded DNA-binding protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TF68_LACRL
ssb; single-stranded DNA-binding family protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_033G1_scaffold_589_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(7756..8052)
DNA (297bp) protein (99aa)
30S ribosomal protein S6 n=13 Tax=Lactobacillus rhamnosus RepID=B5QN64_LACRH
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_589_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8179..8610)
DNA (432bp) protein (144aa)
Single-stranded DNA-binding protein n=7 Tax=Lactobacillus rhamnosus RepID=C7T8G2_LACRG
ssb1; single-stranded DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_033G1_scaffold_589_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8720..8812
DNA (93bp) protein (31aa)
Deoxyribose-phosphate aldolase n=2 Tax=Lactobacillus rhamnosus RepID=B5QN66_LACRH
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:KIC96957.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Deoxyribose-phosphate aldolase
L2_013_033G1_scaffold_589_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8934..9383)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QN67_LACRH
papC; pediocin PapC-like protein
Putative bacteriocin transport accessory protein {ECO:0000313|EMBL:EEN81528.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_033G1_scaffold_589_15
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9406..9486)
DNA (81bp) protein (27aa)
Transposase n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp22 RepID=S2NA03_LACPA
is53; transposase IS5 family protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ18939.1}; TaxID=1051661 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UW4.;"
Displaying 15 items

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