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L2_013_037G1_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 154 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_037G1_scaffold_26_1
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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310..591
DNA (282bp) protein (94aa)
CRISPR-associated protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XZ60_9FIRM
CRISPR-associated protein {ECO:0000313|EMBL:EJZ68970.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
L2_013_037G1_scaffold_26_2
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

552..755
DNA (204bp) protein (68aa)
CRISPR-associated protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XZ60_9FIRM
CRISPR-associated protein {ECO:0000313|EMBL:EJZ68970.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
L2_013_037G1_scaffold_26_3
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

752..949
DNA (198bp) protein (66aa)
CRISPR-associated protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XZ60_9FIRM
CRISPR-associated protein {ECO:0000313|EMBL:EJZ68970.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
L2_013_037G1_scaffold_26_4
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

925..1146
DNA (222bp) protein (74aa)
CRISPR-associated protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XZ60_9FIRM
CRISPR-associated protein {ECO:0000313|EMBL:EJZ68970.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
L2_013_037G1_scaffold_26_5
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1166..2500
DNA (1335bp) protein (445aa)
Tm1812 family CRISPR-associated protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XEQ1_9FIRM
Tm1812 family CRISPR-associated protein {ECO:0000313|EMBL:EJZ68971.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
CRISPR-associated protein DxTHG motif protein
L2_013_037G1_scaffold_26_6
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3097..3972
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M069_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO48075.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L2_013_037G1_scaffold_26_7
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3976..4449
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M069_9FIRM
CRISPR-associated (Cas) DxTHG domain protein {ECO:0000313|EMBL:ETO94565.1}; Flags: Fragment;; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
L2_013_037G1_scaffold_26_8
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4439..4759
DNA (321bp) protein (107aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M068_9FIRM
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EHO48074.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
addiction module antitoxin, RelB/DinJ family
L2_013_037G1_scaffold_26_9
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4773..5642
DNA (870bp) protein (290aa)
Ig domain protein group 2 domain protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SW34_CLOC7
Ig domain-containing protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:ADL51178.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L2_013_037G1_scaffold_26_10
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6844..8763)
DNA (1920bp) protein (640aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LNU9_9FIRM
CRISPR-associated protein cas1
L2_013_037G1_scaffold_26_11
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8772..9032)
DNA (261bp) protein (87aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M066_9FIRM
CRISPR-associated Cas2 family protein
L2_013_037G1_scaffold_26_12
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9838..10248)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M063_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO48215.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
hypothetical protein
L2_013_037G1_scaffold_26_13
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10611..12380
DNA (1770bp) protein (590aa)
ATPase, AAA family n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M062_9FIRM
ATPase, AAA family {ECO:0000313|EMBL:EHO48214.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
stage V sporulation protein K
L2_013_037G1_scaffold_26_14
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12541..13542
DNA (1002bp) protein (334aa)
Rod shape-determining protein MreB n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M061_9FIRM
Rod shape-determining protein MreB {ECO:0000313|EMBL:EHO48213.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
rod shape-determining protein MreB
L2_013_037G1_scaffold_26_15
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13544..15778
DNA (2235bp) protein (745aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
RecD/TraA family helicase (EC:3.1.11.5)
Helicase, RecD/TraA family n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M060_9FIRM
L2_013_037G1_scaffold_26_16
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15771..16496
DNA (726bp) protein (242aa)
ComF family protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M059_9FIRM
ComF family protein {ECO:0000313|EMBL:EHO48211.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
phosphoribosyltransferase
L2_013_037G1_scaffold_26_17
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16561..17187
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M058_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO48210.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
hypothetical protein
L2_013_037G1_scaffold_26_18
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17288..17986
DNA (699bp) protein (233aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
Uridylate kinase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M057_9FIRM
uridylate kinase
L2_013_037G1_scaffold_26_19
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18028..18582
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M056_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
ribosome recycling factor
L2_013_037G1_scaffold_26_20
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18678..19385
DNA (708bp) protein (236aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M055_9FIRM
L2_013_037G1_scaffold_26_21
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19385..20185
DNA (801bp) protein (267aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M054_9FIRM
L2_013_037G1_scaffold_26_22
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20190..21329
DNA (1140bp) protein (380aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M053_9FIRM
L2_013_037G1_scaffold_26_23
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21326..22363
DNA (1038bp) protein (346aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
RIP metalloprotease RseP n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M052_9FIRM
putative membrane-associated Zn-dependent protease
L2_013_037G1_scaffold_26_24
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22360..23418
DNA (1059bp) protein (353aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LNW4_9FIRM
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L2_013_037G1_scaffold_26_25
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23420..27862
DNA (4443bp) protein (1481aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
DNA polymerase III polC-type n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M050_9FIRM
DNA polymerase III, alpha subunit
L2_013_037G1_scaffold_26_26
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27887..28030
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M043_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO48230.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L2_013_037G1_scaffold_26_27
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28081..28509
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M044_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO48231.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
hypothetical protein
L2_013_037G1_scaffold_26_28
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28606..28962
DNA (357bp) protein (119aa)
Helix-turn-helix protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M045_9FIRM
UPF0122 protein HMPREF9099_03117 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
hypothetical protein
L2_013_037G1_scaffold_26_29
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


28973..30328
DNA (1356bp) protein (452aa)
Signal recognition particle protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M046_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
signal recognition particle protein
L2_013_037G1_scaffold_26_30
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


30395..30637
DNA (243bp) protein (81aa)
30S ribosomal protein S16 n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1M047_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
SSU ribosomal protein S16P
Displaying items 1-30 of 154 in total

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